Q86XI2 (CNDG2_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 79.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Condensin-2 complex subunit G2 Alternative name(s): Chromosome-associated protein G2 Short name=CAP-G2 Short name=hCAP-G2 Leucine zipper protein 5 Non-SMC condensin II complex subunit G2 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 1143 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Regulatory subunit of the condensin-2 complex, a complex which establishes mitotic chromosome architecture and is involved in physical rigidity of the chromatid axis. Ref.5 |
| Subunit structure | Component of the condensin-2 complex, which contains the SMC2 and SMC4 heterodimer, and 3 non SMC subunits that probably regulate the complex: NCAPH2, NCAPD3 and NCAPG2. Ref.5 |
| Subcellular location | |
| Sequence similarities | Contains 1 HEAT repeat. |
| Sequence caution | The sequence AAH20560.1 differs from that shown. Reason: Erroneous initiation. The sequence BAB14219.1 differs from that shown. Reason: Erroneous initiation. The sequence BAB14534.1 differs from that shown. Reason: Erroneous initiation. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Cell cycle Cell division DNA condensation Mitosis |
| Cellular component | Nucleus |
| Coding sequence diversity | Alternative splicing Polymorphism |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | cell division Inferred from electronic annotation. Source: UniProtKB-KW chromosome condensationInferred from electronic annotation. Source: UniProtKB-KW inner cell mass cell proliferationInferred from electronic annotation. Source: Compara mitosisInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular_component | nucleus Inferred from direct assay. Source: HPA |
| Molecular_function | methylated histone residue binding Inferred from direct assay PubMed 20622854. Source: UniProtKB |
| Complete GO annotation... | |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q86XI2-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q86XI2-2) The sequence of this isoform differs from the canonical sequence as follows: 1128-1143: FLYESSSRTLGELLNS → YEDLLCCPGWALTPGLLDSIYPSASVPIG |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1143 | 1143 | Condensin-2 complex subunit G2 | PRO_0000255942 | |||||
Regions | |||||||||
| Repeat | 460 – 498 | 39 | HEAT | ||||||
Amino acid modifications | |||||||||
| Modified residue | 30 | 1 | Phosphoserine Ref.6 Ref.8 | ||||||
| Modified residue | 805 | 1 | Phosphothreonine Ref.7 Ref.8 | ||||||
| Modified residue | 1119 | 1 | Phosphothreonine Ref.7 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1128 – 1143 | 16 | FLYES…ELLNS → YEDLLCCPGWALTPGLLDSI YPSASVPIG in isoform 2. | VSP_021311 | |||||
| Natural variant | 794 | 1 | T → M. Corresponds to variant rs10248318 [ dbSNP | Ensembl ]. | VAR_053046 | |||||
| Natural variant | 867 | 1 | E → D. Corresponds to variant rs3214000 [ dbSNP | Ensembl ]. | VAR_053047 | |||||
Experimental info | |||||||||
| Sequence conflict | 369 | 1 | E → G in BAB14219. Ref.4 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). Tissue: Endometrium. |
| [2] | "Human chromosome 7: DNA sequence and biology." Scherer S.W., Cheung J., MacDonald J.R., Osborne L.R., Nakabayashi K., Herbrick J.-A., Carson A.R., Parker-Katiraee L., Skaug J., Khaja R., Zhang J., Hudek A.K., Li M., Haddad M., Duggan G.E., Fernandez B.A., Kanematsu E., Gentles S. Tsui L.-C.Science 300:767-772(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Testis. |
| [4] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 352-1143. Tissue: Ovary. |
| [5] | "Differential contributions of condensin I and condensin II to mitotic chromosome architecture in vertebrate cells." Ono T., Losada A., Hirano M., Myers M.P., Neuwald A.F., Hirano T. Cell 115:109-121(2003) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY, IDENTIFICATION IN THE CONDENSIN-II COMPLEX, FUNCTION, SUBCELLULAR LOCATION. |
| [6] | "Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle." Daub H., Olsen J.V., Bairlein M., Gnad F., Oppermann F.S., Korner R., Greff Z., Keri G., Stemmann O., Mann M. Mol. Cell 31:438-448(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-30, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [7] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-805 AND THR-1119, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [8] | "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-30 AND THR-805, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [9] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | BX537845 mRNA. Translation: CAD97854.1. CH236954 Genomic DNA. Translation: EAL23929.1. BC005878 mRNA. Translation: AAH05878.2. BC020560 mRNA. Translation: AAH20560.1. Different initiation. BC043404 mRNA. Translation: AAH43404.1. AK022744 mRNA. Translation: BAB14219.1. Different initiation. AK023347 mRNA. Translation: BAB14534.1. Different initiation. |
| IPI | IPI00396058. IPI00797030. |
| RefSeq | NP_060230.5. NM_017760.5. |
| UniGene | Hs.18616. |
3D structure databases | |
| ProteinModelPortal | Q86XI2. |
| ModBase | Search... |
Protein-protein interaction databases | |
| MINT | MINT-4329936. |
| STRING | 9606.ENSP00000348657. |
PTM databases | |
| PhosphoSite | Q86XI2. |
Polymorphism databases | |
| DMDM | 74727834. |
Proteomic databases | |
| PaxDb | Q86XI2. |
| PRIDE | Q86XI2. |
Protocols and materials databases | |
| DNASU | 54892. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000356309; ENSP00000348657; ENSG00000146918. ENST00000409339; ENSP00000387007; ENSG00000146918. ENST00000409423; ENSP00000386569; ENSG00000146918. ENST00000449727; ENSP00000388326; ENSG00000146918. |
| GeneID | 54892. |
| KEGG | hsa:54892. |
| UCSC | uc003wnv.1. human. uc011kwe.1. human. |
Organism-specific databases | |
| CTD | 54892. |
| GeneCards | GC07M158424. |
| HGNC | HGNC:21904. NCAPG2. |
| HPA | HPA026631. |
| MIM | 608532. gene. |
| neXtProt | NX_Q86XI2. |
| PharmGKB | PA162397212. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG261934. |
| HOVERGEN | HBG074124. |
| KO | K11492. |
| OMA | FPIRDPN. |
| OrthoDB | EOG4SQWW1. |
Gene expression databases | |
| ArrayExpress | Q86XI2. |
| Bgee | Q86XI2. |
| CleanEx | HS_NCAPG2. |
| Genevestigator | Q86XI2. |
| GermOnline | ENSG00000146918. Homo sapiens. |
Family and domain databases | |
| Gene3D | 1.25.10.10. 1 hit. |
| InterPro | IPR011989. ARM-like. IPR016024. ARM-type_fold. IPR024741. Condensin2_G2. [Graphical view] |
| Pfam | PF12422. Condensin2nSMC. 2 hits. [Graphical view] |
| SUPFAM | SSF48371. ARM-type_fold. 1 hit. |
| PROSITE | PS50077. HEAT_REPEAT. False negative. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChiTaRS | NCAPG2. human. |
| GenomeRNAi | 54892. |
| NextBio | 57890. |
| SOURCE | Search... |
Entry information
| Entry name | CNDG2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q86XI2 Secondary accession number(s): A4D228 Q9H9K6 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 7 Human chromosome 7: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
