Q86XA9 (HTR5A_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 84.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: HEAT repeat-containing protein 5A | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 2040 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Sequence similarities | Belongs to the HEATR5 family. Contains 2 HEAT repeats. |
| Sequence caution | The sequence BAA91098.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. |
Ontologies
| Keywords | |
|---|---|
| Coding sequence diversity | Alternative splicing |
| Domain | Repeat |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| None. [Check GOA] | |
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q86XA9-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q86XA9-2) The sequence of this isoform differs from the canonical sequence as follows: 1741-1815: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 3 (identifier: Q86XA9-3) The sequence of this isoform differs from the canonical sequence as follows: 114-2040: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 2040 | 2040 | HEAT repeat-containing protein 5A | PRO_0000311990 | |||||
Regions | |||||||||
| Repeat | 846 – 883 | 38 | HEAT 1 | ||||||
| Repeat | 1079 – 1116 | 38 | HEAT 2 | ||||||
Amino acid modifications | |||||||||
| Modified residue | 1110 | 1 | Phosphoserine Ref.7 | ||||||
| Modified residue | 1115 | 1 | Phosphothreonine Ref.7 | ||||||
| Modified residue | 1647 | 1 | Phosphoserine Ref.7 | ||||||
Natural variations | |||||||||
| Alternative sequence | 114 – 2040 | 1927 | Missing in isoform 3. | VSP_029685 | |||||
| Alternative sequence | 1741 – 1815 | 75 | Missing in isoform 2. | VSP_029686 | |||||
Experimental info | |||||||||
| Sequence conflict | 429 | 1 | L → P in CAH18282. Ref.4 | ||||||
| Sequence conflict | 880 | 1 | V → M in AAH45764. Ref.3 | ||||||
| Sequence conflict | 880 | 1 | V → M in CAH18282. Ref.4 | ||||||
| Sequence conflict | 880 | 1 | V → M in BAA92554. Ref.5 | ||||||
| Sequence conflict | 1199 | 1 | S → P in BAA91098. Ref.6 | ||||||
| Sequence conflict | 1257 | 1 | N → T in AAH63867. Ref.3 | ||||||
| Sequence conflict | 1525 | 1 | R → T in CAH18282. Ref.4 | ||||||
Sequences
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References
| [1] | "The DNA sequence and analysis of human chromosome 14." Heilig R., Eckenberg R., Petit J.-L., Fonknechten N., Da Silva C., Cattolico L., Levy M., Barbe V., De Berardinis V., Ureta-Vidal A., Pelletier E., Vico V., Anthouard V., Rowen L., Madan A., Qin S., Sun H., Du H. Weissenbach J.Nature 421:601-607(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [2] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 263-2040 (ISOFORM 1). Tissue: PNS and Uterus. |
| [4] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 368-2040 (ISOFORM 2). Tissue: Amygdala and Testis. |
| [5] | "Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro." Nagase T., Kikuno R., Ishikawa K., Hirosawa M., Ohara O. DNA Res. 7:65-73(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 451-2040 (ISOFORM 1). Tissue: Brain. |
| [6] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1172-1758 (ISOFORM 1). Tissue: Hepatoma and Placenta. |
| [7] | "Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle." Daub H., Olsen J.V., Bairlein M., Gnad F., Oppermann F.S., Korner R., Greff Z., Keri G., Stemmann O., Mann M. Mol. Cell 31:438-448(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1110; THR-1115 AND SER-1647, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [8] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AL136418 Genomic DNA. No translation available. AL139353 Genomic DNA. No translation available. CH471078 Genomic DNA. Translation: EAW65949.1. BC045764 mRNA. Translation: AAH45764.1. BC062720 mRNA. Translation: AAH62720.1. BC063867 mRNA. Translation: AAH63867.1. AL117511 mRNA. Translation: CAB55971.1. CR749444 mRNA. Translation: CAH18282.1. AB037737 mRNA. Translation: BAA92554.1. AK000343 mRNA. Translation: BAA91098.1. Different initiation. |
| IPI | IPI00329192. IPI00876909. IPI01013086. |
| PIR | T17281. |
| RefSeq | NP_056288.2. NM_015473.3. |
| UniGene | Hs.370299. |
3D structure databases | |
| ProteinModelPortal | Q86XA9. |
| ModBase | Search... |
PTM databases | |
| PhosphoSite | Q86XA9. |
Polymorphism databases | |
| DMDM | 162416245. |
Proteomic databases | |
| PaxDb | Q86XA9. |
| PRIDE | Q86XA9. |
Protocols and materials databases | |
| DNASU | 25938. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000382464; ENSP00000371903; ENSG00000129493. ENST00000389961; ENSP00000374611; ENSG00000129493. ENST00000439348; ENSP00000405407; ENSG00000129493. |
| GeneID | 25938. |
| KEGG | hsa:25938. |
| UCSC | uc001wrh.3. human. uc010ami.3. human. |
Organism-specific databases | |
| CTD | 25938. |
| GeneCards | GC14M031760. |
| H-InvDB | HIX0011581. |
| HGNC | HGNC:20276. HEATR5A. |
| HPA | HPA049539. |
| neXtProt | NX_Q86XA9. |
| PharmGKB | PA162390632. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG289817. |
| HOVERGEN | HBG056837. |
| InParanoid | Q86XA9. |
Gene expression databases | |
| ArrayExpress | Q86XA9. |
| Bgee | Q86XA9. |
| CleanEx | HS_HEATR5A. |
| Genevestigator | Q86XA9. |
Family and domain databases | |
| Gene3D | 1.25.10.10. 4 hits. |
| InterPro | IPR011989. ARM-like. IPR016024. ARM-type_fold. [Graphical view] |
| SUPFAM | SSF48371. ARM-type_fold. 2 hits. |
| PROSITE | PS50077. HEAT_REPEAT. False negative. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChiTaRS | HEATR5A. human. |
| GenomeRNAi | 25938. |
| NextBio | 47498. |
Entry information
| Entry name | HTR5A_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q86XA9 Secondary accession number(s): Q68DD8 Q9UFQ3 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 14 Human chromosome 14: entries, gene names and cross-references to MIM |
| SIMILARITY comments Index of protein domains and families |

Clusters with
