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Protein

Putative uncharacterized protein C17orf82

Gene

C17orf82

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein C17orf82
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Unplaced

Organism-specific databases

HGNCiHGNC:32699. C17orf82.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA145008807.

Polymorphism and mutation databases

BioMutaiC17orf82.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 251251Putative uncharacterized protein C17orf82PRO_0000284528Add
BLAST

Proteomic databases

PaxDbiQ86X59.
PRIDEiQ86X59.

PTM databases

PhosphoSiteiQ86X59.

Expressioni

Gene expression databases

BgeeiQ86X59.
CleanExiHS_C17orf82.

Organism-specific databases

HPAiHPA044422.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
TRAF2Q129333EBI-8465536,EBI-355744

Protein-protein interaction databases

BioGridi132677. 7 interactions.
IntActiQ86X59. 6 interactions.
MINTiMINT-8417623.
STRINGi9606.ENSP00000335229.

Structurei

3D structure databases

ProteinModelPortaliQ86X59.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410KCBC. Eukaryota.
ENOG4110P51. LUCA.
OrthoDBiEOG7BZVTM.

Sequencei

Sequence statusi: Complete.

Q86X59-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRPLEGQPL RALDLYPEPA FLRSGKDPKS SPASSPSFAV LGPEVRSTGG
60 70 80 90 100
QAGSRRRPSA PCSQDRAAAE GAPALLGGSP SSGSPGHPPG SAFGVEAGCR
110 120 130 140 150
ALNVSEHARG GFALGLPFGL SGGAYLFLLL DGAGDPKPTP EAPISSADGR
160 170 180 190 200
AWFPSESSWQ LPQLPAGSTS GSEPRARPGL GPRQLLTGPR DGAAGQGPGR
210 220 230 240 250
GLTARLGRER EIDCGPRQAG HGGTATDTGR AGSGARHRPP RDRGTPGLRT

H
Length:251
Mass (Da):25,393
Last modified:November 24, 2009 - v2
Checksum:i191ADB9061E330BF
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti186 – 1861L → P.1 Publication
Corresponds to variant rs9907379 [ dbSNP | Ensembl ].
VAR_031769

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005746 Genomic DNA. No translation available.
BC046200 mRNA. Translation: AAH46200.1.
RefSeqiNP_982249.2. NM_203425.2.
UniGeneiHs.434459.

Genome annotation databases

GeneIDi388407.
KEGGihsa:388407.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005746 Genomic DNA. No translation available.
BC046200 mRNA. Translation: AAH46200.1.
RefSeqiNP_982249.2. NM_203425.2.
UniGeneiHs.434459.

3D structure databases

ProteinModelPortaliQ86X59.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi132677. 7 interactions.
IntActiQ86X59. 6 interactions.
MINTiMINT-8417623.
STRINGi9606.ENSP00000335229.

PTM databases

PhosphoSiteiQ86X59.

Polymorphism and mutation databases

BioMutaiC17orf82.

Proteomic databases

PaxDbiQ86X59.
PRIDEiQ86X59.

Protocols and materials databases

DNASUi388407.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi388407.
KEGGihsa:388407.

Organism-specific databases

CTDi388407.
GeneCardsiC17orf82.
HGNCiHGNC:32699. C17orf82.
HPAiHPA044422.
neXtProtiNX_Q86X59.
PharmGKBiPA145008807.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410KCBC. Eukaryota.
ENOG4110P51. LUCA.
OrthoDBiEOG7BZVTM.

Miscellaneous databases

GenomeRNAii388407.
NextBioi102035.
PROiQ86X59.

Gene expression databases

BgeeiQ86X59.
CleanExiHS_C17orf82.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "The DNA sequence and biology of human chromosome 19."
    Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., Caenepeel S., Carrano A.V.
    , Caoile C., Chan Y.M., Christensen M., Cleland C.A., Copeland A., Dalin E., Dehal P., Denys M., Detter J.C., Escobar J., Flowers D., Fotopulos D., Garcia C., Georgescu A.M., Glavina T., Gomez M., Gonzales E., Groza M., Hammon N., Hawkins T., Haydu L., Ho I., Huang W., Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., Larionov V., Leem S.-H., Lopez F., Lou Y., Lowry S., Malfatti S., Martinez D., McCready P.M., Medina C., Morgan J., Nelson K., Nolan M., Ovcharenko I., Pitluck S., Pollard M., Popkie A.P., Predki P., Quan G., Ramirez L., Rash S., Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A., She X., Smith D., Slezak T., Solovyev V., Thayer N., Tice H., Tsai M., Ustaszewska A., Vo N., Wagner M., Wheeler J., Wu K., Xie G., Yang J., Dubchak I., Furey T.S., DeJong P., Dickson M., Gordon D., Eichler E.E., Pennacchio L.A., Richardson P., Stubbs L., Rokhsar D.S., Myers R.M., Rubin E.M., Lucas S.M.
    Nature 428:529-535(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT PRO-186.
    Tissue: Eye.

Entry informationi

Entry nameiCQ082_HUMAN
AccessioniPrimary (citable) accession number: Q86X59
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 17, 2007
Last sequence update: November 24, 2009
Last modified: April 13, 2016
This is version 78 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 17
    Human chromosome 17: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.