Q86V48 (LUZP1_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 81.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Leucine zipper protein 1 | ||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 1076 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Subcellular location | Nucleus. Note: Also detected in soma and dendrites of neurons By similarity. |
| Sequence caution | The sequence AAH33219.1 differs from that shown. Reason: Erroneous initiation. The sequence CAI19705.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Nucleus |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Coiled coil |
| PTM | Acetylation Phosphoprotein |
| Technical term | Complete proteome Direct protein sequencing Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | artery development Inferred from electronic annotation. Source: Compara neural fold bendingInferred from electronic annotation. Source: Compara ventricular septum developmentInferred from electronic annotation. Source: Compara |
| Cellular_component | nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Complete GO annotation... | |
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q86V48-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q86V48-2) The sequence of this isoform differs from the canonical sequence as follows: 1025-1025: E → SS 1026-1076: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 3 (identifier: Q86V48-3) The sequence of this isoform differs from the canonical sequence as follows: 1025-1025: E → VSSSLSPLSLFSLPFPSLPFPFSPLLWPV 1026-1076: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Initiator methionine | 1 | 1 | Removed Ref.3 | ||||||
| Chain | 2 – 1076 | 1075 | Leucine zipper protein 1 | PRO_0000234550 | |||||
Regions | |||||||||
| Coiled coil | 11 – 359 | 349 | Potential | ||||||
Amino acid modifications | |||||||||
| Modified residue | 2 | 1 | N-acetylalanine Ref.3 | ||||||
| Modified residue | 394 | 1 | Phosphoserine Ref.5 | ||||||
| Modified residue | 570 | 1 | Phosphoserine Ref.7 | ||||||
| Modified residue | 574 | 1 | Phosphoserine Ref.8 | ||||||
| Modified residue | 611 | 1 | Phosphoserine Ref.9 | ||||||
| Modified residue | 659 | 1 | Phosphoserine Ref.5 Ref.7 Ref.8 Ref.9 | ||||||
| Modified residue | 679 | 1 | Phosphothreonine Ref.7 | ||||||
| Modified residue | 690 | 1 | Phosphoserine Ref.5 Ref.7 Ref.8 | ||||||
| Modified residue | 745 | 1 | Phosphoserine Ref.8 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1025 | 1 | E → SS in isoform 2. | VSP_018351 | |||||
| Alternative sequence | 1025 | 1 | E → VSSSLSPLSLFSLPFPSLPF PFSPLLWPV in isoform 3. | VSP_018352 | |||||
| Alternative sequence | 1026 – 1076 | 51 | Missing in isoform 2 and isoform 3. | VSP_018353 | |||||
| Natural variant | 317 | 1 | S → A. Corresponds to variant rs12091554 [ dbSNP | Ensembl ]. | VAR_056932 | |||||
| Natural variant | 458 | 1 | G → S. Ref.2 Ref.4 Corresponds to variant rs477830 [ dbSNP | Ensembl ]. | VAR_026283 | |||||
| Natural variant | 461 | 1 | Q → K. Ref.2 Ref.4 Corresponds to variant rs3765407 [ dbSNP | Ensembl ]. | VAR_026284 | |||||
| Natural variant | 491 | 1 | T → I. Corresponds to variant rs35917050 [ dbSNP | Ensembl ]. | VAR_056933 | |||||
| Natural variant | 868 | 1 | D → N. Ref.2 Ref.4 Corresponds to variant rs10799790 [ dbSNP | Ensembl ]. | VAR_026285 | |||||
| Natural variant | 1034 | 1 | S → N. Corresponds to variant rs12066671 [ dbSNP | Ensembl ]. | VAR_056934 | |||||
Experimental info | |||||||||
| Sequence conflict | 25 | 1 | R → P in BAB84979. Ref.4 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. Bentley D.R.Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [2] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 856-1076 (ISOFORM 1), VARIANTS SER-458; LYS-461 AND ASN-868. Tissue: Pancreas and Testis. |
| [3] | Bienvenut W.V., Dozynkiewicz M., Norman J.C. Submitted (JUN-2009) to UniProtKB Cited for: PROTEIN SEQUENCE OF 2-14 AND 673-691, CLEAVAGE OF INITIATOR METHIONINE, ACETYLATION AT ALA-2, MASS SPECTROMETRY. Tissue: Ovarian carcinoma. |
| [4] | "Characterization of long cDNA clones from human adult spleen. II. The complete sequences of 81 cDNA clones." Jikuya H., Takano J., Kikuno R., Hirosawa M., Nagase T., Nomura N., Ohara O. DNA Res. 10:49-57(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 8-1076 (ISOFORM 3), VARIANTS SER-458; LYS-461 AND ASN-868. Tissue: Spleen. |
| [5] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-394; SER-659 AND SER-690, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [6] | "Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis." Cantin G.T., Yi W., Lu B., Park S.K., Xu T., Lee J.-D., Yates J.R. III J. Proteome Res. 7:1346-1351(2008) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [7] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-570; SER-659; THR-679 AND SER-690, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [8] | "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-574; SER-659; SER-690 AND SER-745, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [9] | "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation." Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B. Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-611 AND SER-659, MASS SPECTROMETRY. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AL031428 Genomic DNA. Translation: CAI19705.1. Sequence problems. BC033219 mRNA. Translation: AAH33219.1. Different initiation. BC051733 mRNA. Translation: AAH51733.1. AK074153 mRNA. Translation: BAB84979.1. |
| IPI | IPI00296830. IPI00395737. IPI00744623. |
| RefSeq | NP_001136018.1. NM_001142546.1. NP_361013.3. NM_033631.3. |
| UniGene | Hs.257900. |
3D structure databases | |
| ProteinModelPortal | Q86V48. |
| SMR | Q86V48. Positions 326-353. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP-33113N. |
| IntAct | Q86V48. 2 interactions. |
| STRING | 9606.ENSP00000363752. |
PTM databases | |
| PhosphoSite | Q86V48. |
Polymorphism databases | |
| DMDM | 97072093. |
Proteomic databases | |
| PaxDb | Q86V48. |
| PRIDE | Q86V48. |
Protocols and materials databases | |
| DNASU | 7798. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000302291; ENSP00000303758; ENSG00000169641. ENST00000314174; ENSP00000313705; ENSG00000169641. ENST00000374623; ENSP00000363752; ENSG00000169641. ENST00000418342; ENSP00000393460; ENSG00000169641. |
| GeneID | 7798. |
| KEGG | hsa:7798. |
| UCSC | uc001bgk.2. human. uc001bgl.3. human. |
Organism-specific databases | |
| CTD | 7798. |
| GeneCards | GC01M023410. |
| H-InvDB | HIX0000240. |
| HGNC | HGNC:14985. LUZP1. |
| HPA | HPA028506. HPA028542. |
| MIM | 601422. gene. |
| neXtProt | NX_Q86V48. |
| PharmGKB | PA30487. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG10839. |
| HOGENOM | HOG000246948. |
| HOVERGEN | HBG081939. |
| InParanoid | Q86V48. |
| OMA | VKKIMGG. |
Gene expression databases | |
| ArrayExpress | Q86V48. |
| Bgee | Q86V48. |
| CleanEx | HS_LUZP1. |
| Genevestigator | Q86V48. |
| GermOnline | ENSG00000169641. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR026734. Luzp1. [Graphical view] |
| PANTHER | PTHR23166:SF1. PTHR23166:SF1. 1 hit. |
| ProtoNet | Search... |
Other | |
| ChiTaRS | LUZP1. human. |
| GenomeRNAi | 7798. |
| NextBio | 30166. |
| SOURCE | Search... |
Entry information
| Entry name | LUZP1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q86V48 Secondary accession number(s): Q5TH93, Q8N4X3, Q8TEH1 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |

Clusters with
