Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q86UF2

- CTGE6_HUMAN

UniProt

Q86UF2 - CTGE6_HUMAN

Protein

cTAGE family member 6

Gene

CTAGE6

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 74 (01 Oct 2014)
      Sequence version 2 (22 Sep 2009)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    cTAGE family member 6
    Short name:
    Protein cTAGE-6
    Gene namesi
    Name:CTAGE6
    Synonyms:CTAGE6P
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 7

    Organism-specific databases

    HGNCiHGNC:28644. CTAGE6.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA165617921.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 777777cTAGE family member 6PRO_0000384149Add
    BLAST

    Proteomic databases

    MaxQBiQ86UF2.
    PaxDbiQ86UF2.
    PRIDEiQ86UF2.

    PTM databases

    PhosphoSiteiQ86UF2.

    Expressioni

    Gene expression databases

    CleanExiHS_CTAGE6.
    GenevestigatoriQ86UF2.

    Organism-specific databases

    HPAiHPA000387.
    HPA000922.

    Structurei

    3D structure databases

    ProteinModelPortaliQ86UF2.
    ModBaseiSearch...
    MobiDBiSearch...

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei39 – 5921HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Coiled coil

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Coiled coili118 – 269152Sequence AnalysisAdd
    BLAST
    Coiled coili339 – 498160Sequence AnalysisAdd
    BLAST

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi691 – 77585Pro-richAdd
    BLAST

    Sequence similaritiesi

    Belongs to the cTAGE family.Curated

    Keywords - Domaini

    Coiled coil, Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG133684.
    HOGENOMiHOG000112043.
    HOVERGENiHBG051216.

    Sequencei

    Sequence statusi: Complete.

    Q86UF2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEEPGATPQP YLGLVLEELR RVVAALPESM RPDENPYGFP SELVVCAAVI    50
    GFFVVLLFLW RSFRSVRSRL YVGREQKLGA TLSGLIEEKC KLLEKFSLIQ 100
    KEYEGYEVES SLEDASFEKA AAEEARSLEA TCEKLNRSNS ELEDEILCLE 150
    KDLKEEKSKH SQQDELMADI SKSIQSLEDE SKSLKSQIAE AKIICKTFKM 200
    SEERRAIAIK DALNENSQLQ TSHKQLFQQE AEVWKGEVSE LNKQKITFED 250
    SKVHAEQVLN DKENHIKTLT GHLPMMKDQA AVLEEDTTDD DNLELEVNSQ 300
    WENGANLDDP LKGALKKLIH AAKLNVSLKS LEGERNHIII QLSEVDKTKE 350
    ELTEHIKNLQ TQQESLQSEN IYFESENQKL QQKLKIMTEF YQEDEMKLYR 400
    KLTVEENYRI EEEEKLSKVE EKLSRATEQL ETYRKLAKDL EEELERTVHF 450
    YQKQVISYEK RGHDNWLAAR TAERNLSDLR KENAHNKQKL TETELKFELL 500
    EKDPNALDVS NTAFGREHAP NGPAPLGQRS SETRAFLSPQ TLLEDPLGLS 550
    PVLPEGGGRG PRGPGNPLDH QITNERGEPS CDRLTDPHRA PSDTGSLSSP 600
    VEQDCKMMFP PPGQSYPDSA LPPQREDRFY SNSERLSGSA EPRSFKMTSL 650
    DKMDGSMPSE MESSRNDAKD DLGNLNVPDS SLPAENEATG PGFIPPPLAP 700
    VRGPLFPVDT RGPFMRRGPP FPPPPPGTMF GASRGYFPPR DFPGPPHAPF 750
    AMRNIYPPRG LPPYFHPRPG FYPNPAF 777
    Length:777
    Mass (Da):87,900
    Last modified:September 22, 2009 - v2
    Checksum:iCD26899AC51E30C0
    GO

    Sequence cautioni

    The sequence BC043153 differs from that shown. Reason: Frameshift at position 63.

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti237 – 2371E → Q in AAI01324. (PubMed:15489334)Curated
    Sequence conflicti237 – 2371E → Q in AAI01325. (PubMed:15489334)Curated
    Sequence conflicti296 – 2961E → K in AAI01324. (PubMed:15489334)Curated
    Sequence conflicti311 – 3111L → P in AAI01324. (PubMed:15489334)Curated
    Sequence conflicti348 – 3481T → S in AAI01325. (PubMed:15489334)Curated
    Sequence conflicti364 – 3641E → A in AAI01325. (PubMed:15489334)Curated
    Sequence conflicti412 – 4121E → G in BC043153. (PubMed:15489334)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC106862 mRNA. No translation available.
    BC043153 mRNA. No translation available.
    BC101323 mRNA. Translation: AAI01324.1.
    BC101324 mRNA. Translation: AAI01325.1.
    CCDSiCCDS64790.1.
    RefSeqiNP_848656.2. NM_178561.4.
    UniGeneiHs.676333.

    Genome annotation databases

    EnsembliENST00000470691; ENSP00000474388; ENSG00000271321.
    GeneIDi340307.
    KEGGihsa:340307.
    UCSCiuc003wdk.4. human.

    Polymorphism databases

    DMDMi259016213.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC106862 mRNA. No translation available.
    BC043153 mRNA. No translation available.
    BC101323 mRNA. Translation: AAI01324.1 .
    BC101324 mRNA. Translation: AAI01325.1 .
    CCDSi CCDS64790.1.
    RefSeqi NP_848656.2. NM_178561.4.
    UniGenei Hs.676333.

    3D structure databases

    ProteinModelPortali Q86UF2.
    ModBasei Search...
    MobiDBi Search...

    PTM databases

    PhosphoSitei Q86UF2.

    Polymorphism databases

    DMDMi 259016213.

    Proteomic databases

    MaxQBi Q86UF2.
    PaxDbi Q86UF2.
    PRIDEi Q86UF2.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000470691 ; ENSP00000474388 ; ENSG00000271321 .
    GeneIDi 340307.
    KEGGi hsa:340307.
    UCSCi uc003wdk.4. human.

    Organism-specific databases

    CTDi 340307.
    GeneCardsi GC07M143459.
    HGNCi HGNC:28644. CTAGE6.
    HPAi HPA000387.
    HPA000922.
    neXtProti NX_Q86UF2.
    PharmGKBi PA165617921.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi NOG133684.
    HOGENOMi HOG000112043.
    HOVERGENi HBG051216.

    Miscellaneous databases

    GenomeRNAii 340307.
    NextBioi 97811.
    PROi Q86UF2.

    Gene expression databases

    CleanExi HS_CTAGE6.
    Genevestigatori Q86UF2.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "The DNA sequence of human chromosome 7."
      Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H., Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R., Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E., Fewell G.A., Delehaunty K.D., Miner T.L.
      , Nash W.E., Cordes M., Du H., Sun H., Edwards J., Bradshaw-Cordum H., Ali J., Andrews S., Isak A., Vanbrunt A., Nguyen C., Du F., Lamar B., Courtney L., Kalicki J., Ozersky P., Bielicki L., Scott K., Holmes A., Harkins R., Harris A., Strong C.M., Hou S., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Leonard S., Rohlfing T., Rock S.M., Tin-Wollam A.-M., Abbott A., Minx P., Maupin R., Strowmatt C., Latreille P., Miller N., Johnson D., Murray J., Woessner J.P., Wendl M.C., Yang S.-P., Schultz B.R., Wallis J.W., Spieth J., Bieri T.A., Nelson J.O., Berkowicz N., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Bedell J.A., Mardis E.R., Clifton S.W., Chissoe S.L., Marra M.A., Raymond C., Haugen E., Gillett W., Zhou Y., James R., Phelps K., Iadanoto S., Bubb K., Simms E., Levy R., Clendenning J., Kaul R., Kent W.J., Furey T.S., Baertsch R.A., Brent M.R., Keibler E., Flicek P., Bork P., Suyama M., Bailey J.A., Portnoy M.E., Torrents D., Chinwalla A.T., Gish W.R., Eddy S.R., McPherson J.D., Olson M.V., Eichler E.E., Green E.D., Waterston R.H., Wilson R.K.
      Nature 424:157-164(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Testis.

    Entry informationi

    Entry nameiCTGE6_HUMAN
    AccessioniPrimary (citable) accession number: Q86UF2
    Secondary accession number(s): A4FU29, Q3ZCM5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 4, 2005
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 74 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 7
      Human chromosome 7: entries, gene names and cross-references to MIM
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3