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Protein
Submitted name:

SBF1 protein

Gene

SBF1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
SBF1 proteinImported
Gene namesi
Name:SBF1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Expressioni

Gene expression databases

BgeeiQ86TK5.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000370196.

Structurei

3D structure databases

ProteinModelPortaliQ86TK5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 PH domain.UniRule annotation
Contains myotubularin phosphatase domain.SAAS annotation

Phylogenomic databases

HOGENOMiHOG000044360.
HOVERGENiHBG101679.

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
InterProiIPR030574. MTMR5.
IPR010569. Myotubularin-like_Pase_dom.
IPR030564. Myotubularin_fam.
IPR001849. PH_domain.
IPR011993. PH_like_dom.
IPR029021. Prot-tyrosine_phosphatase-like.
[Graphical view]
PANTHERiPTHR10807. PTHR10807. 1 hit.
PTHR10807:SF43. PTHR10807:SF43. 1 hit.
PfamiPF06602. Myotub-related. 1 hit.
PF00169. PH. 1 hit.
[Graphical view]
SMARTiSM00233. PH. 1 hit.
[Graphical view]
SUPFAMiSSF52799. SSF52799. 1 hit.
PROSITEiPS50003. PH_DOMAIN. 1 hit.
PS51339. PPASE_MYOTUBULARIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q86TK5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
GAHTLAGQSS GFTPVFLQFL DCVHQVHLQF PMEFEFSQFY LKFLGYHHVS
60 70 80 90 100
RRFRTFLLDS DYERIELGLL YEEKGERRGQ VPCRSVWEYV DRLSKRTPVF
110 120 130 140 150
HNYMYAPEDA EVLRPYSNVS NLKVWDFYTE ETLAEGPPYD WELAQGPPEP
160 170 180 190 200
PEEERSDGGA PQSRRRVVWP CYDSCPRAQP DAISRLLEEL QRLETELGQP
210 220 230 240 250
AERWKDTWDR VKAAQRLEGR PDGRGTPSSL LVSTAPHHRR SLGVYLQEGP
260 270 280 290 300
VGSTLSLSLD SDQSSGSTTS GSRQAARRST STLYSQFQTA ESENRSYEGT
310 320 330 340 350
LYKKGAFMKP WKARWFVLDK TKHQLRYYDH RVDTECKGVI DLAEVEAVAP
360 370 380 390 400
GTPTMGAPKT VDEKAFFDVK TTRRVYNFCA QDVPSAQQWV DRIQSCLSDA
Length:400
Mass (Da):45,819
Last modified:March 1, 2004 - v2
Checksum:iFFDC1B903872F42D
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC046169 mRNA. Translation: AAH46169.2.
UniGeneiHs.589924.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC046169 mRNA. Translation: AAH46169.2.
UniGeneiHs.589924.

3D structure databases

ProteinModelPortaliQ86TK5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000370196.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOGENOMiHOG000044360.
HOVERGENiHBG101679.

Miscellaneous databases

ChiTaRSiSBF1. human.

Gene expression databases

BgeeiQ86TK5.

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
InterProiIPR030574. MTMR5.
IPR010569. Myotubularin-like_Pase_dom.
IPR030564. Myotubularin_fam.
IPR001849. PH_domain.
IPR011993. PH_like_dom.
IPR029021. Prot-tyrosine_phosphatase-like.
[Graphical view]
PANTHERiPTHR10807. PTHR10807. 1 hit.
PTHR10807:SF43. PTHR10807:SF43. 1 hit.
PfamiPF06602. Myotub-related. 1 hit.
PF00169. PH. 1 hit.
[Graphical view]
SMARTiSM00233. PH. 1 hit.
[Graphical view]
SUPFAMiSSF52799. SSF52799. 1 hit.
PROSITEiPS50003. PH_DOMAIN. 1 hit.
PS51339. PPASE_MYOTUBULARIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Peripheral Nervous SystemImported.

Entry informationi

Entry nameiQ86TK5_HUMAN
AccessioniPrimary (citable) accession number: Q86TK5
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: March 1, 2004
Last modified: June 24, 2015
This is version 72 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.