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Q86KS0 (Q86KS0_DICDI) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:DDB_0169392, DDB_G0277757 EMBL EAL68552.1
OrganismDictyostelium discoideum (Slime mold)
Taxonomic identifier44689 [NCBI]
Taxonomic lineageEukaryotaAmoebozoaMycetozoaDictyosteliidaDictyostelium

Protein attributes

Sequence length375 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q86KS0 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: EC9A1D744C56856E

FASTA37541,862
        10         20         30         40         50         60 
MKLLLILIIG FLGSLLINNY GVLSTEICTN GIDQVIYDDQ LGYTVSDWSW AKPRNFTNFK 

        70         80         90        100        110        120 
PVHSGSYSIS FVPKTYEAIY LNLQNPIDPS IISSVSFWVH GNKVGNQKVI VRFTSNKVAV 

       130        140        150        160        170        180 
SRDFFLWGDE SIILSDPSVS SKALSKNIQA GKWVNAVINC DKLEPGQYDG IQIAASGEDV 

       190        200        210        220        230        240 
QEMVFIDDIE VNKRCISTNP YRNLMKPVSC DGHDCIVINV TETSSQMRWF ANEIEYQKYT 

       250        260        270        280        290        300 
VTMKNTNNAA VEVLEFTGGW FKPRNSSDIW NVAFLEGGYY GLPDNVKVIY PGQEYIFGCV 

       310        320        330        340        350        360 
SIKGPVSFKV SYVEYENDKD RLTNSKPIES NSKPPVKTPT VKPTVKPTIK PTIKPTSKPT 

       370 
TKPTTKPTTK TLVSA 

« Hide

References

[1]"The genome of the social amoeba Dictyostelium discoideum."
The Dictyostelium discoideum Sequencing Consortium
Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N. expand/collapse author list , Davies R., Gaudet P., Fey P., Pilcher K., Chen G., Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N., Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E., Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N., Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D., Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T., Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D., Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A., Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M., Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A., Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y., Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C., Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R., Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.
Nature 435:43-57(2005) [PubMed: 15875012] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AX4.
[2]"Sequence and analysis of chromosome 2 of Dictyostelium discoideum."
Dictyostelium Genome Sequencing Consortium
Gloeckner G., Eichinger L., Szafranski K., Pachebat J.A., Bankier A.T., Dear P.H., Lehmann R., Baumgart C., Parra G., Abril J.F., Guigo R., Kumpf K., Tunggal B., Cox E.C., Quail M.A., Platzer M., Rosenthal A., Noegel A.A.
Nature 418:79-85(2002) [PubMed: 12097910] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AX4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AAFI02000022 Genomic DNA. Translation: EAL68552.1.
RefSeqXP_642495.1. XM_637403.1.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyCBM8. Carbohydrate-Binding Module Family 8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsDDB0169392; DDB0169392; DDB_G0277757.
GeneID8621206.
KEGGddi:DDB_G0277757.

Organism-specific databases

dictyBaseDDB_G0277757.

Phylogenomic databases

InParanoidQ86KS0.

Family and domain databases

InterProIPR019028. CBM_49.
[Graphical view]
PfamPF09478. CBM49. 1 hit.
[Graphical view]
SMARTSM01063. CBM49. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ86KS0_DICDI
AccessionPrimary (citable) accession number: Q86KS0
Secondary accession number(s): Q54Z58
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: January 25, 2012
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)