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Reviewed, UniProtKB/Swiss-Prot Q86B87 (MMD4_DROME)

Last modified November 24, 2009. Version 65. Feed History...

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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Alternative products · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Modifier of mdg4
Gene names
Name: mod(mdg4)
Synonyms: bpd, doom, E(var)3-93D
ORF Names: CG32491
OrganismDrosophila melanogaster (Fruit fly) [Complete proteome]
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryotaMetazoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Protein attributes

Sequence length610 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

General annotation (Comments)

Function

Component of the gypsy chromatin insulator complex which is required for the function of the gypsy chromatin insulator and other endogenous chromatin insulators. Chromatin insulators are regulatory elements which establish independent domains of transcriptional activity within eukaryotic genomes. Insulators have two defining properties; they can block the communication between an enhancer and a promoter when placed between them and can also buffer transgenes from position effect variegation (PEV). Insulators are proposed to structure the chromatin fiber into independent domains of differing transcriptional potential by promoting the formation of distinct chromatin loops. This chromatin looping may involve the formation of insulator bodies, where homotypic interactions between individual subunits of the insulator complex could promote the clustering of widely spaced insulators at the nuclear periphery. Within the gypsy insulator complex, this protein may control the nature of the repressive effect of su(Hw): in the absence of mod(mdg4) protein, su(Hw) exerts a bidirectional silencing effect, whereas in the presence of mod(mdg4), the silencing effect is unidirectional. Isoform H is specifically required to maintain the pairing of achiasmate homologs in male meiosis I which is mediated by the rDNA repeats on the achiasmate X-Y bivalents. Isoform H also plays a role in apoptotic regulatory pathways. Ref.1 Ref.2 Ref.3 Ref.4 Ref.9 Ref.10 Ref.11 Ref.12 Ref.13 Ref.17 Ref.18 Ref.21

Subunit structure

Can self-associate. Isoform mod2.2 is a component of the gypsy chromatin insulator complex, composed of Cp190, mod(mdg4) and su(Hw). The gypsy chromatin insulator complex interacts with Topors via mod(mdg4) and su(Hw). Isoform mod2.2 also interacts with Trl/GAGA and interaction with this protein may bypass the repressive effects of the su(Hw) insulator. Interacts with Chi. Ref.2 Ref.18 Ref.16 Ref.19 Ref.20 Ref.22

Subcellular location

Nucleus. Note: Colocalizes with other elements of the gypsy chromatin insulator complex at multiple sites on polytene chromosomes and at nuclear insulator bodies. The unique C-termini of individual isoforms may specify binding to particular chromosomal locations. During the G2 phase of male meiosis isoform H localizes to the nucleolus. It subsequently localizes to the rDNA repeats of the X-Y bivalent and to multiple autosomal loci, where it remains until anaphase I. Localization to the rDNA repeats requires SA-2, while localization to autosomal loci requires SA-2 and tef. Ref.1 Ref.4 Ref.12 Ref.21 Ref.16 Ref.19 Ref.22 Ref.14

Developmental stage

Expressed both maternally and zygotically. Zygotic expression is high in pupae and adult females but low in other stages of development. Ref.4

Domain

Homotypic interactions mediated by the BTB (POZ) domain of this protein may promote the clustering of distant insulator complexes into nuclear insulator bodies.

Sequence similarities

Contains 1 BTB (POZ) domain.

Contains 1 FLYWCH-type zinc finger.

Sequence caution

The sequence AAA82990.1 differs from that shown. Reason: Miscellaneous discrepancy. Intron retention.

The sequence AAL29128.1 differs from that shown. Reason: Miscellaneous discrepancy. Intron retention.

Ontologies

Keywords
   Biological processApoptosis
Transcription
Transcription regulation
   Cellular componentNucleus
   Coding sequence diversityAlternative splicing
   DomainZinc-finger
   LigandMetal-binding
Zinc
   Molecular functionChromatin regulator
   PTMPhosphoprotein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processapoptosis

Inferred from electronic annotation. Source: UniProtKB-KW

chromatin modification

Inferred from electronic annotation. Source: UniProtKB-KW

germ cell migration Ref.15

Inferred from genetic interaction. Source: FlyBase

induction of apoptosis Ref.3

Inferred from mutant phenotype. Source: UniProtKB

male meiosis I

Inferred from mutant phenotype. Source: FlyBase

male meiosis chromosome segregation

Inferred from mutant phenotype. Source: FlyBase

nucleus organization

Traceable author statement. Source: FlyBase

oogenesis Ref.4

Inferred from mutant phenotype. Source: FlyBase

regulation of chromatin assembly or disassembly Ref.2

Inferred from mutant phenotype. Source: UniProtKB

regulation of transcription

Inferred from electronic annotation. Source: UniProtKB-KW

transcription

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentchromatin Ref.2

Inferred from mutant phenotype. Source: UniProtKB

nucleus Ref.4

Inferred from direct assay. Source: FlyBase

polytene chromosome Ref.4

Inferred from direct assay. Source: FlyBase

   Molecular functionSUMO binding

Inferred from physical interaction. Source: FlyBase

chromatin binding Ref.2

Inferred from mutant phenotype. Source: UniProtKB

zinc ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Alternative products

This entry describes 31 isoforms produced by alternative splicing. [Align] [Select]
Isoform mod2.2 Ref.4 (identifier: Q86B87-1)

Also known as: 67.2; E(VAR)3-93D;

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Note: C-terminal exons are translated from the opposite DNA strand. This may be due to a trans-splicing event.
Isoform 53.1 (identifier: Q86B87-16)

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → GDATQFFFTK...KDRGRASQRM
Note: C-terminal exons are translated from the opposite DNA strand. This may be due to a trans-splicing event.
Isoform 53.6 (identifier: Q86B87-28)

The sequence of this isoform differs from the canonical sequence as follows:
     404-610: ATSASATKIP...LQKALQNKKK → CYQLVPNRRG...RCRKRPGDRK
Note: C-terminal exons are translated from the opposite DNA strand. This may be due to a trans-splicing event.
Isoform 54.7 (identifier: Q86B87-23)

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → EQEDDFKLHL...SALSGLHNHP
Note: C-terminal exons are translated from the opposite DNA strand. This may be due to a trans-splicing event.
Isoform 55.6 (identifier: Q86B87-13)

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → GHLSTLRHLP...HNHPPKKRRL
Note: C-terminal exons are translated from the opposite DNA strand. This may be due to a trans-splicing event.
Isoform 59.0 (identifier: Q86B87-25)

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → VTQHVRNCGP...EGNPDHLPKM
Note: C-terminal exons are translated from the opposite DNA strand. This may be due to a trans-splicing event.
Isoform 62.3 (identifier: Q86B87-4)

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → ESSVAIYSAT...GGTRVVSRRK
Note: C-terminal exons are translated from the opposite DNA strand. This may be due to a trans-splicing event.
Isoform A Ref.5 (identifier: Q86B87-17)

Also known as: 54.2;

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → EKQFEYVVSQ...QYMKLQLNNV
Isoform AA (identifier: Q86B87-29)

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → VLTYDDRGKL...CPPRPHKEDY
Note: No experimental confirmation available.
Isoform AC (identifier: Q86B87-30)

The sequence of this isoform differs from the canonical sequence as follows:
     404-610: ATSASATKIP...LQKALQNKKK → FHIDFADSKK...IKSKLRNQDF
Note: No experimental confirmation available.
Isoform AB (identifier: Q86B87-31)

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → GVIQSLKALF...DLLDEFPELQ
Note: No experimental confirmation available.
Isoform B (identifier: Q86B87-27)

Also known as: 54.6;

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → VTFDVLTDPI...YAVSGVHNHP
Note: No experimental confirmation available.
Isoform C Ref.1 Ref.4 (identifier: Q86B87-9)

Also known as: 58.0; 3;

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → DGPSKDTAIP...LKLMPIKEGK

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier
Sequence conflict4221V → A in CAA53215. Ref.1
Isoform D (identifier: Q86B87-24)

Also known as: 57.4;

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → EFDYGHGQYR...PQSMAHMFDM
Isoform E Ref.4 (identifier: Q86B87-2)

Also known as: 65.0;

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → VKIKMEPSPT...HGAVFISKDY
Isoform F Ref.4 (identifier: Q86B87-8)

Also known as: 58.6;

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → VVLANDEVPN...EELNELTHDV

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier
Sequence conflict5211S → T in CAB85480. Ref.4
Isoform G Ref.4 (identifier: Q86B87-15)

Also known as: 54.2;

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → ELAVFGTGQR...REKALSLDAS
Isoform H Ref.3 Ref.4 (identifier: Q86B87-10)

Also known as: 56.3; Doom; MNM;

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → DLGELNPSNL...VAISGVHNHL

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier
Sequence conflict4471D → A in CAB85478. Ref.4
Isoform I Ref.4 (identifier: Q86B87-6)

Also known as: 59.1;

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → VCDDLDDMKG...LSIEDLNNLQ
Isoform J Ref.4 (identifier: Q86B87-19)

Also known as: 51.4;

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → GSVAYYSYIT...KCGQHNHPPY
Isoform K Ref.4 (identifier: Q86B87-11)

Also known as: 55.7;

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → GQFIGDIPRG...MPKDAFYPQY

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier
Sequence conflict4841A → P in CAB85477. Ref.4
Isoform L Ref.5 (identifier: Q86B87-18)

Also known as: 52.2;

The sequence of this isoform differs from the canonical sequence as follows:
     404-610: ATSASATKIP...LQKALQNKKK → KDQNKGVLLK...EHAQHCLQCY

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier
Sequence conflict4691A → T in CAC51387. Ref.5
Isoform M (identifier: Q86B87-14)

Also known as: 55.3;

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → DRKRYSKKFL...SLKMPWVFTD
Isoform N Ref.4 (identifier: Q86B87-3)

Also known as: 64.2;

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → DTEISFIRSQ...HRSLLKSEHP
Isoform O Ref.4 (identifier: Q86B87-5)

Also known as: 60.1;

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → EDELVFIESP...MHASMMLMHE

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier
Sequence conflict5431M → I in CAB85483. Ref.4
Isoform P Ref.6 (identifier: Q86B87-7)

Also known as: 58.6;

The sequence of this isoform differs from the canonical sequence as follows:
     404-610: ATSASATKIP...LQKALQNKKK → KFDYQISVDV...AATSAPATTT
Isoform Q Ref.4 (identifier: Q86B87-21)

Also known as: 46.3;

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → GCDGLQGSCRDRGGQKLTGANHQMHLRA
Isoform R Ref.4 (identifier: Q86B87-20)

Also known as: 52.0;

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → GTSHLATFSC...RLKYAKHSHL
Isoform S Ref.4 (identifier: Q86B87-12)

Also known as: 55.1;

The sequence of this isoform differs from the canonical sequence as follows:
     403-610: AATSASATKI...LQKALQNKKK → GLIFKAARHI...CEPCFEELHS
Isoform mod1.8 (identifier: Q86B87-26)

The sequence of this isoform differs from the canonical sequence as follows:
     459-610: GVKLIFNGHL...LQKALQNKKK → DPTRPQLWSS...ILPTQTFVFC
Isoform mod1.9 (identifier: Q86B87-22)

The sequence of this isoform differs from the canonical sequence as follows:
     360-449: Missing.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 610610Modifier of mdg4
PRO_0000096505

Regions

Domain32 – 9867BTB
Zinc finger452 – 51261FLYWCH-type
Region1 – 308308Interaction with Chi
Region1 – 160160Self-association
Region551 – 61060Interaction with su(Hw)
Compositional bias139 – 20971Gln-rich

Amino acid modifications

Modified residue2301Phosphoserine Ref.23

Natural variations

Alternative sequence360 – 44990Missing in isoform mod1.9.
VSP_010283
Alternative sequence403 – 610208AATSA…QNKKK → GDATQFFFTKGQRESVKLNY CGHSYVKFMENGRGTKWICA TRSTTKCRARIRTTKNNYLE VLYASHNHGFPPQKKDRGRA SQRM in isoform 53.1. Ref.1 Ref.3 Ref.4 Ref.5
VSP_050724
Alternative sequence403 – 610208AATSA…QNKKK → EQEDDFKLHLPLLVTRRKKT PGGSRKQSFDHLEVSFTRSN RGNNLLTIDGKPFTLDRRIK DVCYWECVKLRCKYIKCSAR VVTKSNRISALSGLHNHP in isoform 54.7.
VSP_010287
Alternative sequence403 – 610208AATSA…QNKKK → GHLSTLRHLPVEAIFDADGK QMDFIPNIRVIRSQRKTIKL MFKKYAYSKTNEHDTTTYWH CRSRRNGRPACKARFSTKKL KNGSYKVYLTQPEHNHPPKK RRL in isoform 55.6.
VSP_050725
Alternative sequence403 – 610208AATSA…QNKKK → VTQHVRNCGPQMFLISRKGG TLLTINNFVYRSNLKFFGKS NNILYWECVQNRSVKCRSRL KTIGDDLYVTNDVHNHMGDN KRIEAAKAAGMLIHKKLSSL TAADKIQGSWKMDTEGNPDH LPKM in isoform 59.0.
VSP_010288
Alternative sequence403 – 610208AATSA…QNKKK → ESSVAIYSATSRGRMQLIYG GQPFIFEKTLKLSSGEEKRF WRCNQWWNQKCRSRVFTIND VVCPLNRFHTHEEIVRRKKR VRRVPPVETIAKVVATTPRH PQHQQTTQQQQEIQLTSDAI AGAILDDESPATIDVSELGM HLKYEEIVADVTGIVGGTRV VSRRK in isoform 62.3.
VSP_050701
Alternative sequence403 – 610208AATSA…QNKKK → EKQFEYVVSQKGHVLLLHKK FPFIREKCINGKTYWRCTQY TTKTKCHGRLHVLNGKIVHI KTHNHSPLDQERKQYMKLQL NNV in isoform A.
VSP_050713
Alternative sequence403 – 610208AATSA…QNKKK → VLTYDDRGKLVHEGFTFSCY SRNPGKCLAFWRCSMYKKMH CTSALTTHIKSIKSIRGFHN HKPPERLKTFVPRVLDCPPR PHKEDY in isoform AA.
VSP_034704
Alternative sequence403 – 610208AATSA…QNKKK → GVIQSLKALFEGKTTGASIQ YTTTQRGRVMLVYEGYRYVV NRQSLKNVFWRCSRYVKHSC RATLVTSKVQEVTLRIAGTP HTHAPEVSSMDLTTDLLDEF PELQ in isoform AB.
VSP_034705
Alternative sequence403 – 610208AATSA…QNKKK → VTFDVLTDPIVKPDQHQLMK RVRLSKSMEGVHYVRTPAGN VVLHCGEHRYLRNAAYKDKV YWKCSKWRKQCRSRVITHIL PNGQSRYAVSGVHNHP in isoform B.
VSP_010284
Alternative sequence403 – 610208AATSA…QNKKK → DGPSKDTAIPKPAEHPRKPV TDSVQKSPRDADAIPLFDGS RVFVSKVALAKAYIPMPMIY TCRVMDLVIGKDKLVRIAQH EETTDKDLIQDIITHVCKVF ALRGNQLTPSAVQEFIDHKL STLKLMPIKEGK in isoform C.
VSP_050714
Alternative sequence403 – 610208AATSA…QNKKK → EFDYGHGQYRGNNPQIQFSV SKRGGQLLWLDGMKFFRNNI NRTNLYWRCHWYYRHTKCPV LICMSKTNSNDFRQIHDHCH IRPKRKENSGTGDGPKIRTP VVSNVRSLPQSMAHMFDM in isoform D.
VSP_010285
Alternative sequence403 – 610208AATSA…QNKKK → VKIKMEPSPTPGHSSDAAVA ALAVTYLSDEESFRKPFTLP KLLDGKFYKNIQPNQKTPGA IQATCTTCHGLISGTTKSTG NFLSHIKRRHKELLPLCQLY CQAKANGTVPAVKSSPPNPN HVLTSATPTPAMEMMTQVAQ MPPTAAYATGPTHLGMPVTV PVPVSMSLAMPISLPHVQTP QMMALMQQHQAHGAVFISKD Y in isoform E.
VSP_050699
Alternative sequence403 – 610208AATSA…QNKKK → VVLANDEVPNPEDVLVFFTQ SLRGRPAIMANGIRFLIMSE NKKKILWRCSSMATKKLKCP ARITMLKETPPKFIINKAEH LHAELKRNKYSSSKAQTLRD PHQMATKLDCEMEGAGGVSF DLHEEELNELTHDV in isoform F.
VSP_050704
Alternative sequence403 – 610208AATSA…QNKKK → ELAVFGTGQRGRTVLLFQNE KFVKNRCSASRTYWICSKKD VTVCRARVVTAVDKNSQERI IKCTYEHDHSRKFPSNNVNL PVLIKREKALSLDAS in isoform G.
VSP_050715
Alternative sequence403 – 610208AATSA…QNKKK → DLGELNPSNLADFGNESFLP KTKGKRPQNVRCGLAPDQKC VRTLDDWDRIRYDRTRSGDV LVYDGYRYDRRANYNDIIYW GCAKKRLSCNVYMITHKNKP TYVAISGVHNHL in isoform H.
VSP_050716
Alternative sequence403 – 610208AATSA…QNKKK → VCDDLDDMKGAIKHSLLTFI RGQRGCKLLAFNGHNYVRNR RSNLKTYWICSKKGSTKCNA RVVTNVVEGVHKIVLESCHH TCLNTERKKRLSVTNVVGKA RSKSEKSVSTGFIKEEGDED LTLELRTLNLSIEDLNNLQ in isoform I.
VSP_050703
Alternative sequence403 – 610208AATSA…QNKKK → GSVAYYSYITGFRGSRKLKI GEFSFTRNKTSGLKTYWSCA RAGVHKCKARVVTAQDHDVT IKCGQHNHPPY in isoform J.
VSP_050717
Alternative sequence403 – 610208AATSA…QNKKK → GQFIGDIPRGQWIDKHEYFF LKNQKQGFNLVFNGYMYKKE ASFRATVNWICSDGNGKRLN ENKCSARAITKFDGGIKLGK NAHNHPPRFLGGKVPAKLMP KDAFYPQY in isoform K.
VSP_050718
Alternative sequence403 – 610208AATSA…QNKKK → DRKRYSKKFLNFDGPAEFSL AAHRRPRLIIANKHFIVHRI LGKDNLIGSWRCMYHHKGCK ARATTFMVDSEVKYRSTCSS HNHKNVRSQQQSLKMPWVFT D in isoform M.
VSP_050720
Alternative sequence403 – 610208AATSA…QNKKK → DTEISFIRSQKKNAQLVFRN YIYNKKLTQANGQTTWRCAD VLKLRCKAVVITRDGHFIDA RRQHNHESHASRIGQRQLYK VEQELEEYIEICTSNPKISQ YLGSSNIIVTAKDGKDCKLF LPAAEATEIEMQALVDAAEE ELDEEERHAEERIRDRQRVG RWRTEEAKHRSLLKSEHP in isoform N.
VSP_050700
Alternative sequence403 – 610208AATSA…QNKKK → EDELVFIESPWSTPCLVLNG YMYNCHSRKSNKQYWRCHNY SKKAHEMRCRSRCVLENGRL KSVTGGLHNHQPHTEKIDKI IQRNKMAAIGTGRKLSRTHS FTQLQLQEQKQEFIDEHQLT SDAATLQLTDQELMHASMML MHE in isoform O.
VSP_050702
Alternative sequence403 – 610208AATSA…QNKKK → GCDGLQGSCRDRGGQKLTGA NHQMHLRA in isoform Q.
VSP_050721
Alternative sequence403 – 610208AATSA…QNKKK → GTSHLATFSCTRKKKRKLVI DRHEFVMDRKLKSSINWRCA RYRSSNCKVRATTHVQKNGL EVYRLKYAKHSHL in isoform R.
VSP_050722
Alternative sequence403 – 610208AATSA…QNKKK → GLIFKAARHIAPIQKVRQVR DDKFLATIIKLEPAGRLNLK NPDNIIRTSSNEHNFVYVGL PRMKGKCVNCLKKNRTGLRR INTLCNTCPGSNWMCEPCFE ELHS in isoform S.
VSP_050723
Alternative sequence404 – 610207ATSAS…QNKKK → CYQLVPNRRGGKNLIFQGHM YSVERKYRNSINWVCSKNSN SVLRCPARCVTNPESGNGIK LSHRRHNHPADAFKPHKRCR KRPGDRK in isoform 53.6. Ref.5 Ref.6
VSP_010286
Alternative sequence404 – 610207ATSAS…QNKKK → FHIDFADSKKNGGKLLVING FRFFRNKKRGHLQYWKCRNY YKERCPAIAIHDESTLILRL CHQHQHTESNDIEIKPLPGS ETKLAESAEDEAQAEPEAEL DNETDPDTNHEPARVPPLIM EPPPLLEIKSKLRNQDF in isoform AC.
VSP_034706
Alternative sequence404 – 610207ATSAS…QNKKK → KDQNKGVLLKRTAQGEFLVV NGKSYKKTRAMQYRTYFHCL TRNCPTYYVLVELSRRPRLT RHHEHAQHCLQCY in isoform L.
VSP_050719
Alternative sequence404 – 610207ATSAS…QNKKK → KFDYQISVDVGEATMQLANA SSAGVVNSNSPFFIVSKYGT KQIMLKQHTFNRHICRDDVT YWRCSQFAVLRCRARLKTKL DTLTILNSEHNHEVITKARK YGSLKRQRAEAEAAARAERR QDPLETAATSAPATTT in isoform P.
VSP_050705
Alternative sequence459 – 610152GVKLI…QNKKK → DPTRPQLWSSDVPDQPQATL LTINNFVYRANLKFFGKSNN ILYWECVKTDRLSAAVALKT IGDDLYVTNGSYSAVSKCKG HLMASFHLQMCTITWATTSV LRRPRRLDADPQEVEFPHSR RQNPGFLENGHRGQPRPSAQ DVAASILPTQTFVFC in isoform mod1.8.
VSP_010289

Experimental info

Mutagenesis331D → N in allele mod(mdg4)351; embryonic lethal; when associated with S-92.
Mutagenesis921G → S in allele mod(mdg4)351; embryonic lethal; when associated with N-33.
Sequence conflict151 – 1522QQ → HE in AAA82988. Ref.2
Sequence conflict151 – 1522QQ → HE in AAA82989. Ref.2
Sequence conflict151 – 1522QQ → HE in AAA82990. Ref.2
Sequence conflict151 – 1522QQ → HE Ref.3
Sequence conflict4661G → V in AAL33875. Ref.9
Sequence conflict5071E → K in CAA53216. Ref.1
Sequence conflict5071E → K in CAB85487. Ref.4

Sequences

Sequence LengthMass (Da)Tools
Isoform mod2.2 (67.2) (E(VAR)3-93D) [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 79CC78E52D2ADAF5

FASTA61067,171
        10         20         30         40         50         60 
MADDEQFSLC WNNFNTNLSA GFHESLCRGD LVDVSLAAEG QIVKAHRLVL SVCSPFFRKM 

        70         80         90        100        110        120 
FTQMPSNTHA IVFLNNVSHS ALKDLIQFMY CGEVNVKQDA LPAFISTAES LQIKGLTDND 

       130        140        150        160        170        180 
PAPQPPQESS PPPAAPHVQQ QQIPAQRVQR QQPRASARYK IETVDDGLGD EKQSTTQIVI 

       190        200        210        220        230        240 
QTTAAPQATI VQQQQPQQAA QQIQSQQLQT GTTTTATLVS TNKRSAQRSS LTPASSSAGV 

       250        260        270        280        290        300 
KRSKTSTSAN VMDPLDSTTE TGATTTAQLV PQQITVQTSV VSAAEAKLHQ QSPQQVRQEE 

       310        320        330        340        350        360 
AEYIDLPMEL PTKSEPDYSE DHGDAAGDAE GTYVEDDTYG DMRYDDSYFT ENEDAGNQTA 

       370        380        390        400        410        420 
ANTSGGGVTA TTSKAVVKQQ SQNYSESSFV DTSGDQGNTE AQAATSASAT KIPPRKRGRP 

       430        440        450        460        470        480 
KTKVEDQTPK PKLLEKLQAA TLNEEASEPA VYASTTKGGV KLIFNGHLFK FSFRKADYSV 

       490        500        510        520        530        540 
FQCCYREHGE ECKVRVVCDQ KRVFPYEGEH VHFMQASDKS CLPSQFMPGE SGVISSLSPS 

       550        560        570        580        590        600 
KELLMKNTTK LEEADDKEDE DFEEFEIQEI DEIELDEPEK TPAKEEEVDP NDFREKIKRR 

       610 
LQKALQNKKK 

« Hide

Isoform 53.1.

Checksum: FDBF392D523625B0
Show »

FASTA48653,163
Isoform 53.6.

Checksum: A11F19784919ECA9
Show »

FASTA49053,598
Isoform 54.7.

Checksum: 3553CC7CF033D106
Show »

FASTA50054,768
Isoform 55.6.

Checksum: 151D67B2D5AF4B09
Show »

FASTA50555,639
Isoform 59.0.

Checksum: 1370A094F8362FE2
Show »

FASTA52657,477
Isoform 62.3.

Checksum: 3ED3199914164550
Show »

FASTA56762,299
Isoform A (54.2).

Checksum: AA9826AB6148038F
Show »

FASTA48553,387
Isoform AA.

Checksum: 4E94A618509F8E0A
Show »

FASTA48853,509
Isoform AC.

Checksum: 639CD4CC356093A4
Show »

FASTA54059,341
Isoform AB.

Checksum: D23436303F3941D2
Show »

FASTA50655,208
Isoform B (54.6).

Checksum: 54808234E545F377
Show »

FASTA49854,592
Isoform C (58.0) (3).

Checksum: B2111920052F391A
Show »

FASTA53458,074
Isoform D (57.4).

Checksum: C7B5007F97844321
Show »

FASTA52057,399
Isoform E (65.0).

Checksum: A887D5F7B595684C
Show »

FASTA60364,967
Isoform F (58.6).

Checksum: 0CB2EA5DAA49D51F
Show »

FASTA53658,617
Isoform G (54.2).

Checksum: 9FAB36A15DD9D08C
Show »

FASTA49754,270
Isoform H (56.3) (Doom) (MNM).

Checksum: 022205D469E30597
Show »

FASTA51456,411
Isoform I (59.1).

Checksum: D7DD3B7CF114FFD2
Show »

FASTA54159,087
Isoform J (51.4).

Checksum: 266F2F799B396F7C
Show »

FASTA47351,380
Isoform K (55.7).

Checksum: 98A0D72C25E352D9
Show »

FASTA51055,771
Isoform L (52.2).

Checksum: B185798E8C0D9179
Show »

FASTA47652,255
Isoform M (55.3).

Checksum: CDB2A54ABD6E6FD4
Show »

FASTA50355,331
Isoform N (64.2).

Checksum: ED213DBC04CDCE9C
Show »

FASTA58064,190
Isoform O (60.1).

Checksum: CACC30E1C0C6BF3E
Show »

FASTA54560,168
Isoform P (58.6).

Checksum: B72215EDC9459174
Show »

FASTA53958,790
Isoform Q (46.3).

Checksum: D5C44FD56D3A84BA
Show »

FASTA43046,366
Isoform R (52.0).

Checksum: 5F85B8A076A397A4
Show »

FASTA47552,074
Isoform S (55.1).

Checksum: 03003F412683D702
Show »

FASTA50655,261
Isoform mod1.8.

Checksum: 85E0A9750C2A3AE2
Show »

FASTA61366,799
Isoform mod1.9.

Checksum: EBC834C8A8EB3DB8
Show »

FASTA52057,814

References

« Hide 'large scale' references
[1]"The enhancer of position-effect variegation of Drosophila, E(var)3-93D, codes for a chromatin protein containing a conserved domain common to several transcriptional regulators."
Dorn R., Krauss V., Reuter G., Saumweber H.
Proc. Natl. Acad. Sci. U.S.A. 90:11376-11380(1993) [PubMed: 8248257] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] (ISOFORMS C AND MOD2.2), FUNCTION, SUBCELLULAR LOCATION.
Strain: Oregon-R.
Tissue: Embryo.
[2]"A Drosophila protein that imparts directionality on a chromatin insulator is an enhancer of position-effect variegation."
Gerasimova T.I., Gdula D.A., Gerasimov D.V., Simonova O., Corces V.G.
Cell 82:587-597(1995) [PubMed: 7664338] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS MOD1.8; MOD1.9 AND MOD2.2), FUNCTION, INTERACTION WITH SU(HW).
[3]"Doom, a product of the Drosophila mod(mdg4) gene, induces apoptosis and binds to baculovirus inhibitor-of-apoptosis proteins."
Harvey A.J., Bidwai A.P., Miller L.K.
Mol. Cell. Biol. 17:2835-2843(1997) [PubMed: 9111355] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM H), FUNCTION.
Strain: Canton-S.
[4]"Genetic and molecular complexity of the position effect variegation modifier mod(mdg4) in Drosophila."
Buechner K., Roth P., Schotta G., Krauss V., Saumweber H., Reuter G., Dorn R.
Genetics 155:141-157(2000) [PubMed: 10790390] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 53.1; 53.6; 54.7; 55.6; 59.0; 62.3; B; C; D; E; F; G; H; I; J; K; M; N; O; Q; R AND S), FUNCTION, SUBCELLULAR LOCATION, DEVELOPMENTAL STAGE.
[5]"Transgene analysis proves mRNA trans-splicing at the complex mod(mdg4) locus in Drosophila."
Dorn R., Reuter G., Loewendorf A.
Proc. Natl. Acad. Sci. U.S.A. 98:9724-9729(2001) [PubMed: 11493677] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS A; L; P; 53.6 AND 54.7).
[6]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[7]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: GENOME REANNOTATION, ALTERNATIVE SPLICING.
[8]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J.W., Champe M., Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R.A., Gonzalez M., Guarin H., Kapadia B., Kronmiller B., Li P.W., Liao G. expand/collapse author list , Miranda A., Mungall C.J., Nunoo J., Pacleb J.M., Paragas V., Park S., Patel S., Phouanenavong S., Wan K.H., Yu C., Lewis S.E., Rubin G.M., Celniker S.E.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 55.6; AA; E AND P).
Strain: Berkeley.
Tissue: Embryo.
[9]"The gypsy insulator can act as a promoter-specific transcriptional stimulator."
Wei W., Brennan M.D.
Mol. Cell. Biol. 21:7714-7720(2001) [PubMed: 11604507] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 458-610 (ISOFORM MOD2.2), FUNCTION.
Strain: Oregon-R.
[10]"The su(Hw) protein bound to gypsy sequences in one chromosome can repress enhancer-promoter interactions in the paired gene located in the other homolog."
Georgiev P.G., Corces V.G.
Proc. Natl. Acad. Sci. U.S.A. 92:5184-5188(1995) [PubMed: 7761470] [Abstract]
Cited for: FUNCTION.
[11]"Interaction between mutations in the suppressor of Hairy wing and modifier of mdg4 genes of Drosophila melanogaster affecting the phenotype of gypsy-induced mutations."
Georgiev P.G., Kozycina M.
Genetics 142:425-436(1996) [PubMed: 8852842] [Abstract]
Cited for: FUNCTION.
[12]"Polycomb and trithorax group proteins mediate the function of a chromatin insulator."
Gerasimova T.I., Corces V.G.
Cell 92:511-521(1998) [PubMed: 9491892] [Abstract]
Cited for: FUNCTION, SUBCELLULAR LOCATION.
[13]"The gene mod(mdg4) affects synapse specificity and structure in Drosophila."
Gorczyca M., Popova E., Jia X.-X., Budnik V.
J. Neurobiol. 39:447-460(1999) [PubMed: 10363916] [Abstract]
Cited for: FUNCTION.
[14]"A chromatin insulator determines the nuclear localization of DNA."
Gerasimova T.I., Byrd K., Corces V.G.
Mol. Cell 6:1025-1035(2000) [PubMed: 11106742] [Abstract]
Cited for: SUBCELLULAR LOCATION.
[15]"Functional studies of the BTB domain in the Drosophila GAGA and Mod(mdg4) proteins."
Read D., Butte M.J., Dernburg A.F., Frasch M., Kornberg T.B.
Nucleic Acids Res. 28:3864-3870(2000) [PubMed: 11024164] [Abstract]
Cited for: CHARACTERIZATION OF MUTANT MOD(MDG4)351.
[16]"Interactions between the Su(Hw) and Mod(mdg4) proteins required for gypsy insulator function."
Ghosh D., Gerasimova T.I., Corces V.G.
EMBO J. 20:2518-2527(2001) [PubMed: 11350941] [Abstract]
Cited for: SELF-ASSOCIATION, INTERACTION WITH SU(HW), SUBCELLULAR LOCATION.
[17]"The gypsy insulator of Drosophila affects chromatin structure in a directional manner."
Chen S., Corces V.G.
Genetics 159:1649-1658(2001) [PubMed: 11779804] [Abstract]
Cited for: FUNCTION.
[18]"Insulation of enhancer-promoter communication by a gypsy transposon insert in the Drosophila cut gene: cooperation between suppressor of hairy-wing and modifier of mdg4 proteins."
Gause M., Morcillo P., Dorsett D.
Mol. Cell. Biol. 21:4807-4817(2001) [PubMed: 11416154] [Abstract]
Cited for: FUNCTION, SELF-ASSOCIATION, INTERACTION WITH CHI AND SU(HW).
[19]"The centrosomal protein CP190 is a component of the gypsy chromatin insulator."
Pai C.-Y., Lei E.P., Ghosh D., Corces V.G.
Mol. Cell 16:737-748(2004) [PubMed: 15574329] [Abstract]
Cited for: INTERACTION WITH CP190; SU(HW) AND TRL, SUBCELLULAR LOCATION.
[20]"Interaction between the GAGA factor and Mod(mdg4) proteins promotes insulator bypass in Drosophila."
Melnikova L., Juge F., Gruzdeva N., Mazur A., Cavalli G., Georgiev P.G.
Proc. Natl. Acad. Sci. U.S.A. 101:14806-14811(2004) [PubMed: 15465920] [Abstract]
Cited for: INTERACTION WITH TRL.
[21]"Identification of two proteins required for conjunction and regular segregation of achiasmate homologs in Drosophila male meiosis."
Thomas S.E., Soltani-Bejnood M., Roth P., Dorn R., Logsdon J.M. Jr., McKee B.D.
Cell 123:555-568(2005) [PubMed: 16286005] [Abstract]
Cited for: FUNCTION, SUBCELLULAR LOCATION.
[22]"The ubiquitin ligase dTopors directs the nuclear organization of a chromatin insulator."
Capelson M., Corces V.G.
Mol. Cell 20:105-116(2005) [PubMed: 16209949] [Abstract]
Cited for: INTERACTION WITH TOPORS, SUBCELLULAR LOCATION.
[23]"Phosphoproteome analysis of Drosophila melanogaster embryos."
Zhai B., Villen J., Beausoleil S.A., Mintseris J., Gygi S.P.
J. Proteome Res. 7:1675-1682(2008) [PubMed: 18327897] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-230, MASS SPECTROMETRY.
Tissue: Embryo.
+Additional computationally mapped references.

Cross-references

Sequence databases

X75498 Genomic DNA. Translation: CAA53215.1.
X75499 mRNA. Translation: CAA53216.1.
U30905 mRNA. Translation: AAA82988.1.
U30913 mRNA. Translation: AAA82989.1.
U30914 mRNA. Translation: AAA82990.1. Sequence problems.
U62802 mRNA. Translation: AAC17459.1.
AJ277174 mRNA. Translation: CAB85469.1.
AJ277175 mRNA. Translation: CAB85470.1.
AJ277176 mRNA. Translation: CAB85471.1.
AJ277177 mRNA. Translation: CAB85472.1.
AJ277178 mRNA. Translation: CAB85473.1.
AJ277179 mRNA. Translation: CAB85474.1.
AJ277180 mRNA. Translation: CAB85475.1.
AJ277181 mRNA. Translation: CAB85476.1.
AJ277182 mRNA. Translation: CAB85477.1.
AJ277183 mRNA. Translation: CAB85478.1.
AJ277184 mRNA. Translation: CAB85479.1.
AJ277185 mRNA. Translation: CAB85480.1.
AJ277186 mRNA. Translation: CAB85481.1.
AJ277187 mRNA. Translation: CAB85482.1.
AJ277188 mRNA. Translation: CAB85483.1.
AJ277189 mRNA. Translation: CAB85484.1.
AJ277190 mRNA. Translation: CAB85485.1.
AJ277191 mRNA. Translation: CAB85486.1.
AJ277192 mRNA. Translation: CAB85487.1.
AJ277193 mRNA. Translation: CAB85488.1.
AJ277194 mRNA. Translation: CAB85489.1.
AJ320161 mRNA. Translation: CAC51387.1.
AJ320162 mRNA. Translation: CAC51487.1.
AJ320163 mRNA. Translation: CAC51488.1.
AJ320164 mRNA. Translation: CAC51489.1.
AJ320165 mRNA. Translation: CAC51388.1.
AE014297 Genomic DNA. Translation: AAF55882.2.
AE014297 Genomic DNA. Translation: AAF55883.2.
AE014297 Genomic DNA. Translation: AAF55884.1.
AE014297 Genomic DNA. Translation: AAF55885.2.
AE014297 Genomic DNA. Translation: AAF55888.1.
AE014297 Genomic DNA. Translation: AAN13862.1.
AE014297 Genomic DNA. Translation: AAN13863.1.
AE014297 Genomic DNA. Translation: AAN13864.1.
AE014297 Genomic DNA. Translation: AAN13865.1.
AE014297 Genomic DNA. Translation: AAN13866.1.
AE014297 Genomic DNA. Translation: AAN13867.1.
AE014297 Genomic DNA. Translation: AAN13868.1.
AE014297 Genomic DNA. Translation: AAN13869.1.
AE014297 Genomic DNA. Translation: AAN13870.1. Different initiation.
AE014297 Genomic DNA. Translation: AAN13871.1.
AE014297 Genomic DNA. Translation: AAN13872.1.
AE014297 Genomic DNA. Translation: AAN13873.1.
AE014297 Genomic DNA. Translation: AAN13874.1.
AE014297 Genomic DNA. Translation: AAN13875.1.
AE014297 Genomic DNA. Translation: ABW08718.1.
AE014297 Genomic DNA. Translation: ABW08719.1.
AE014297 Genomic DNA. Translation: ABW08720.1.
AY061580 mRNA. Translation: AAL29128.1. Sequence problems.
BT003484 mRNA. Translation: AAO39487.1.
BT003579 mRNA. Translation: AAO39583.1.
BT029698 mRNA. Translation: ABL75755.1.
AF214648 Genomic DNA. Translation: AAL33873.1.
AF214649 Genomic DNA. Translation: AAL33874.1.
AF214650 Genomic DNA. Translation: AAL33875.1.
RefSeqNP_001097856.1.
NP_001097857.1.
NP_001097858.1.
NP_524936.2.
NP_732619.1.
NP_732620.1.
NP_732621.1.
NP_732622.1.
NP_732623.1.
NP_732624.1.
NP_732625.1.
NP_732626.1.
NP_732627.1.
NP_732628.1.
NP_732629.1.
NP_732630.1.
NP_732631.1.
NP_732632.1.
NP_732633.1.
NP_732634.1.
NP_732635.1.
NP_732636.1.
UniGeneDm.35861

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

IntActQ86B87. 40 interactions.
STRINGQ86B87.

Proteomic databases

PRIDEQ86B87.

Genome annotation databases

EnsemblFBtr0084060; FBpp0083459; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0084061; FBpp0083460; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0084062; FBpp0083461; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0084063; FBpp0083462; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0084064; FBpp0083463; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0084065; FBpp0083464; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0084066; FBpp0083465; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0084067; FBpp0083466; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0084068; FBpp0083467; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0084069; FBpp0083468; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0084070; FBpp0083469; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0084071; FBpp0083470; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0084072; FBpp0083471; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0084073; FBpp0083472; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0084074; FBpp0083473; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0084075; FBpp0083474; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0084076; FBpp0083475; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0084077; FBpp0083476; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0084078; FBpp0083477; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0114359; FBpp0112908; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0114360; FBpp0112909; FBgn0002781; Drosophila melanogaster. [Genome view]
FBtr0114361; FBpp0112910; FBgn0002781; Drosophila melanogaster. [Genome view]
GeneID49228.
KEGGdme:Dmel_CG32491.

Organism-specific databases

CTD49228.
FlyBaseFBgn0002781. mod(mdg4).

Enzyme and pathway databases

BioCycDMEL-XXX-02:DMEL-XXX-02-012669-MON.

Gene expression databases

ArrayExpressQ86B87.
GermOnlineCG32491. Drosophila melanogaster.

Family and domain databases

InterProIPR000210. BTB/POZ-like.
IPR011333. BTB/POZ_fold.
IPR013069. BTB_POZ.
IPR007588. Znf_FLYWCH.
[Graphical view]
Gene3DG3DSA:3.30.710.10. BTB/POZ_fold. 1 hit.
PfamPF00651. BTB. 1 hit.
PF04500. FLYWCH. 1 hit.
[Graphical view]
SMARTSM00225. BTB. 1 hit.
[Graphical view]
PROSITEPS50097. BTB. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio839663.

Entry information

Entry nameMMD4_DROME
AccessionPrimary (citable) accession number: Q86B87
Secondary accession number(s): A1A725 expand/collapse secondary AC list , A8JR64, A8JR66, P91932, Q24099, Q24100, Q24101, Q24482, Q24483, Q86B84, Q86B85, Q86B86, Q8IN28, Q8IN29, Q8IN30, Q8IN31, Q8IN32, Q8IN33, Q8IN34, Q8WTI9, Q8WTJ0, Q8WTJ1, Q95R78, Q95ZF4, Q95ZF5, Q95ZF6, Q95ZF7, Q95ZF8, Q9N6U6, Q9N6U7, Q9N6U8, Q9N6U9, Q9N6V0, Q9N6V1, Q9N6V2, Q9N6V3, Q9N6V4, Q9N6V5, Q9N6V6, Q9N6V7, Q9N6V8, Q9N6V9, Q9N6W0, Q9N6W1, Q9N6W2, Q9N6W3, Q9N6W4, Q9N6W5, Q9VDA9, Q9VDB2, Q9VDB3, Q9VDB4, Q9VDB5
Entry history
Integrated into UniProtKB/Swiss-Prot: April 13, 2004
Last sequence update: June 1, 2003
Last modified: November 24, 2009
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectDrosophila annotation project

Relevant documents

Drosophila

Drosophila: entries, gene names and cross-references to FlyBase

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Alternative products · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents