ID   Q86586_9TOMB            Unreviewed;       389 AA.
AC   Q86586;
DT   01-NOV-1996, integrated into UniProtKB/TrEMBL.
DT   01-NOV-1996, sequence version 1.
DT   13-SEP-2023, entry version 52.
DE   RecName: Full=Capsid protein {ECO:0000256|ARBA:ARBA00018091};
DE   AltName: Full=Coat protein {ECO:0000256|ARBA:ARBA00031336};
DE   AltName: Full=p41 {ECO:0000256|ARBA:ARBA00031782};
GN   Name=ORF2 {ECO:0000313|EMBL:QWC36205.1};
OS   Pelargonium leaf curl virus.
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC   Tolivirales; Tombusviridae; Procedovirinae; Tombusvirus;
OC   Tombusvirus pelargonii.
OX   NCBI_TaxID=35280 {ECO:0000313|EMBL:AAB26100.1};
RN   [1] {ECO:0000313|EMBL:AAB26100.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=8470957; DOI=10.1007/BF01316911;
RA   Li Y., Bachmann S., Maiss E., Commandeur U., Breyel E., Timpe U.,
RA   Koenig R.;
RT   "Nucleotide sequence of the coat protein gene of pelargonium leaf curl
RT   virus and comparison of the deduced coat protein amino acid sequence with
RT   those of other tombusviruses.";
RL   Arch. Virol. 129:349-356(1993).
RN   [2] {ECO:0000313|EMBL:AAB26100.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Li Y., Maiss E., Commandeur U., Breyel E., Timpe U., Koenig R.;
RL   Submitted (JUL-2000) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:QWC36205.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=DSMZ PV-0265 {ECO:0000313|EMBL:QWC36205.1};
RA   Knierim D., Margaria P., Menzel W., Winter S.;
RL   Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Capsid protein self-assembles to form an icosahedral capsid
CC       with a T=3 symmetry, about 32-35 nm in diameter, and consisting of 180
CC       capsid proteins. {ECO:0000256|ARBA:ARBA00002495}.
CC   -!- SUBUNIT: Homomultimer. {ECO:0000256|ARBA:ARBA00011553}.
CC   -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC       {ECO:0000256|ARBA:ARBA00007446}.
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DR   EMBL; AF290026; AAB26100.1; -; Genomic_RNA.
DR   EMBL; MT682295; QWC36205.1; -; Genomic_RNA.
DR   PIR; A48355; A48355.
DR   GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 2.60.120.20; -; 1.
DR   InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR   InterPro; IPR029053; Viral_coat.
DR   Pfam; PF00729; Viral_coat; 1.
DR   PRINTS; PR00233; ICOSAHEDRAL.
DR   SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
DR   PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE   3: Inferred from homology;
KW   Capsid protein {ECO:0000313|EMBL:AAB26100.1};
KW   T=3 icosahedral capsid protein {ECO:0000256|ARBA:ARBA00023060};
KW   Virion {ECO:0000256|ARBA:ARBA00023060}.
FT   DOMAIN          78..270
FT                   /note="Icosahedral viral capsid protein S"
FT                   /evidence="ECO:0000259|Pfam:PF00729"
SQ   SEQUENCE   389 AA;  41194 MW;  C1BCEE8FA0756751 CRC64;
     MAMVRRNNNT SIIPVTGMQL ATIVGTAVAG AVGNVVKNNG GAIARTAVGF GKQVVKRFRR
     RKGGGNQQMI QHVGGTGGAI MAPVAVTRQL MGSKPKFTGR MSGSVTVTHR EYLTQVNNTT
     AFAVNGGIVD NLLQLNPLNG TLFAWLPAIA SNFDQYTFNN VVLHYVPLCA TTEVGRVAMY
     FDKDSEDVEP ADRVELANYG VLKETAPWAE ATLNIPCDRI KRYCDDSATV DHKLIDLGQL
     GIATYGGSGT NAIGDVFISY SVTLYYPQPT NSLLSTRRLD LTGASLNGNG PGYIIVSRTP
     TVISMTFRST GTFVLTGAYR CLTASTLGLT GNVNVNSITV LDTLGLATSF IINCTVSSLP
     SVVSFTSTGI TSATINCVRA TRANVVTLA
//