Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Coat protein

Gene
N/A
Organism
Pelargonium leaf curl virus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. structural molecule activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Coat proteinImported
OrganismiPelargonium leaf curl virusImported
Taxonomic identifieri35280 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageTombusviridaeTombusvirus

Subcellular locationi

GO - Cellular componenti

  1. viral capsid Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Capsid proteinImported, Virion

Structurei

3D structure databases

ProteinModelPortaliQ86586.
SMRiQ86586. Positions 69-388.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

Gene3Di2.60.120.20. 1 hit.
InterProiIPR000937. Capsid_prot_S-dom_vir.
IPR029053. Viral_coat.
[Graphical view]
PfamiPF00729. Viral_coat. 1 hit.
[Graphical view]
PRINTSiPR00233. ICOSAHEDRAL.
PROSITEiPS00555. ICOSAH_VIR_COAT_S. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q86586-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAMVRRNNNT SIIPVTGMQL ATIVGTAVAG AVGNVVKNNG GAIARTAVGF
60 70 80 90 100
GKQVVKRFRR RKGGGNQQMI QHVGGTGGAI MAPVAVTRQL MGSKPKFTGR
110 120 130 140 150
MSGSVTVTHR EYLTQVNNTT AFAVNGGIVD NLLQLNPLNG TLFAWLPAIA
160 170 180 190 200
SNFDQYTFNN VVLHYVPLCA TTEVGRVAMY FDKDSEDVEP ADRVELANYG
210 220 230 240 250
VLKETAPWAE ATLNIPCDRI KRYCDDSATV DHKLIDLGQL GIATYGGSGT
260 270 280 290 300
NAIGDVFISY SVTLYYPQPT NSLLSTRRLD LTGASLNGNG PGYIIVSRTP
310 320 330 340 350
TVISMTFRST GTFVLTGAYR CLTASTLGLT GNVNVNSITV LDTLGLATSF
360 370 380
IINCTVSSLP SVVSFTSTGI TSATINCVRA TRANVVTLA
Length:389
Mass (Da):41,194
Last modified:November 1, 1996 - v1
Checksum:iC1BCEE8FA0756751
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF290026 Genomic RNA. Translation: AAB26100.1.
PIRiA48355.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF290026 Genomic RNA. Translation: AAB26100.1.
PIRiA48355.

3D structure databases

ProteinModelPortaliQ86586.
SMRiQ86586. Positions 69-388.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.120.20. 1 hit.
InterProiIPR000937. Capsid_prot_S-dom_vir.
IPR029053. Viral_coat.
[Graphical view]
PfamiPF00729. Viral_coat. 1 hit.
[Graphical view]
PRINTSiPR00233. ICOSAHEDRAL.
PROSITEiPS00555. ICOSAH_VIR_COAT_S. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Nucleotide sequence of the coat protein gene of pelargonium leaf curl virus and comparison of the deduced coat protein amino acid sequence with those of other tombusviruses."
    Li Y., Bachmann S., Maiss E., Commandeur U., Breyel E., Timpe U., Koenig R.
    Arch. Virol. 129:349-356(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. Li Y., Maiss E., Commandeur U., Breyel E., Timpe U., Koenig R.
    Submitted (JUL-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ86586_9TOMB
AccessioniPrimary (citable) accession number: Q86586
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: October 29, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.