Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q86517 (NSP1B_ROTGI) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Non-structural protein 1, peptide 2

Short name=NSP1 peptide 2
Alternative name(s):
NSP1-2
OrganismRotavirus B (isolate Rat/United States/IDIR/1984) (RV-B) (Rotavirus B (isolate infectious diarrhea of infant rats))
Taxonomic identifier28877 [NCBI]
Taxonomic lineageVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirus
Virus hostHomo sapiens (Human) [TaxID: 9606]
Rattus norvegicus (Rat) [TaxID: 10116]

Protein attributes

Sequence length320 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the rotavirus B NSP1-2 family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 320320Non-structural protein 1, peptide 2
PRO_0000369857

Sequences

Sequence LengthMass (Da)Tools
Q86517 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: F393F0F38958BFB8

FASTA32036,220
        10         20         30         40         50         60 
MEFNQFLKEA SGKVDLVPIY MSNPSCNPIH SSRKPGKVSA LKYDNPLKEC PEIPGDSVLI 

        70         80         90        100        110        120 
SDVCPFIHEH FCGGIHIPYQ HNMRPKGRIT HVSADKIVWP CGLRSIKLDG KLVVGHMFVK 

       130        140        150        160        170        180 
CRCGNMYPTW ISGESDFFFI TCCANDTPAI KIGLANGDKC QNCLRLKRWY NPGPGFKSGI 

       190        200        210        220        230        240 
NHYIAPFFCP VCTPIRDLVS NMTRFGAVSF DSPDYAEMKR NYDWKRSYPN NCESAFRSLN 

       250        260        270        280        290        300 
SPLIQTLPTV CDTVCASSGT TVTEMIASIN RSWCTGFKII PINRTRVLLK DDYRGRIIEF 

       310        320 
QDNNHLHNQI MAAMTEWKFL 

« Hide

References

[1]"Expression and sequence analysis of gene 7 of the IDIR agent (group B rotavirus): similarity with NS53 of group A rotavirus."
Eiden J.J.
Virology 199:212-218(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U01164 Genomic RNA. Translation: AAA60453.1.
PIRB49810.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameNSP1B_ROTGI
AccessionPrimary (citable) accession number: Q86517
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: November 1, 1996
Last modified: April 3, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families