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Protein

Non-structural protein 1, peptide 2

Gene
N/A
Organism
Rotavirus B (isolate Rat/United States/IDIR/1984) (RV-B) (Rotavirus B (isolate infectious diarrhea of infant rats))
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Non-structural protein 1, peptide 2
Short name:
NSP1 peptide 2
Alternative name(s):
NSP1-2
OrganismiRotavirus B (isolate Rat/United States/IDIR/1984) (RV-B) (Rotavirus B (isolate infectious diarrhea of infant rats))
Taxonomic identifieri28877 [NCBI]
Taxonomic lineageiVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Rattus norvegicus (Rat) [TaxID: 10116]

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 320320Non-structural protein 1, peptide 2PRO_0000369857Add
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the rotavirus B NSP1-2 family.Curated

Sequencei

Sequence statusi: Complete.

Q86517-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEFNQFLKEA SGKVDLVPIY MSNPSCNPIH SSRKPGKVSA LKYDNPLKEC
60 70 80 90 100
PEIPGDSVLI SDVCPFIHEH FCGGIHIPYQ HNMRPKGRIT HVSADKIVWP
110 120 130 140 150
CGLRSIKLDG KLVVGHMFVK CRCGNMYPTW ISGESDFFFI TCCANDTPAI
160 170 180 190 200
KIGLANGDKC QNCLRLKRWY NPGPGFKSGI NHYIAPFFCP VCTPIRDLVS
210 220 230 240 250
NMTRFGAVSF DSPDYAEMKR NYDWKRSYPN NCESAFRSLN SPLIQTLPTV
260 270 280 290 300
CDTVCASSGT TVTEMIASIN RSWCTGFKII PINRTRVLLK DDYRGRIIEF
310 320
QDNNHLHNQI MAAMTEWKFL
Length:320
Mass (Da):36,220
Last modified:November 1, 1996 - v1
Checksum:iF393F0F38958BFB8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U01164 Genomic RNA. Translation: AAA60453.1.
PIRiB49810.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U01164 Genomic RNA. Translation: AAA60453.1.
PIRiB49810.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "Expression and sequence analysis of gene 7 of the IDIR agent (group B rotavirus): similarity with NS53 of group A rotavirus."
    Eiden J.J.
    Virology 199:212-218(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiNSP1B_ROTGI
AccessioniPrimary (citable) accession number: Q86517
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: November 1, 1996
Last modified: October 1, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.