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Q86516

- NSP1A_ROTGI

UniProt

Q86516 - NSP1A_ROTGI

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Protein

Non-structural protein 1, peptide 1

Gene
N/A
Organism
Rotavirus B (isolate Rat/United States/IDIR/1984) (RV-B) (Rotavirus B (isolate infectious diarrhea of infant rats))
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Non-structural protein 1, peptide 1
Short name:
NSP1 peptide 1
Alternative name(s):
NSP1-1
OrganismiRotavirus B (isolate Rat/United States/IDIR/1984) (RV-B) (Rotavirus B (isolate infectious diarrhea of infant rats))
Taxonomic identifieri28877 [NCBI]
Taxonomic lineageiVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Rattus norvegicus (Rat) [TaxID: 10116]

Subcellular locationi

GO - Cellular componenti

  1. host cell membrane Source: UniProtKB-KW
  2. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Host membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 115115Non-structural protein 1, peptide 1PRO_0000369855Add
BLAST

Structurei

Transmembrane

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei39 – 5921HelicalSequence AnalysisAdd
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the rotavirus B NSP1-1 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Sequencei

Sequence statusi: Complete.

Q86516-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGNRQSSAQL NSHLTQISSQ HSNLYISDSK TSTFQTQHII LVAGVGIIVA
60 70 80 90 100
LFILLVCSCV LNCYLCNKFK RENGIQSISK RSLRQSRPSP NLYVQPVMQS
110
NPFIKEARES ICSEV
Length:115
Mass (Da):12,845
Last modified:November 1, 1996 - v1
Checksum:i55A9F19FFA26194D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U01164 Genomic RNA. Translation: AAA60454.1.
PIRiA49810.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U01164 Genomic RNA. Translation: AAA60454.1 .
PIRi A49810.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

ProtoNeti Search...

Publicationsi

  1. "Expression and sequence analysis of gene 7 of the IDIR agent (group B rotavirus): similarity with NS53 of group A rotavirus."
    Eiden J.J.
    Virology 199:212-218(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiNSP1A_ROTGI
AccessioniPrimary (citable) accession number: Q86516
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: November 1, 1996
Last modified: October 29, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3