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Q86198 (NSP1A_ROTGA) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Non-structural protein 1, peptide 1

Short name=NSP1 peptide 1
Alternative name(s):
NSP1-1
OrganismRotavirus B (isolate Human/China/ADRV/1982) (RV-B) (Rotavirus B (isolate adult diarrhea rotavirus))
Taxonomic identifier10942 [NCBI]
Taxonomic lineageVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirus
Virus hostHomo sapiens (Human) [TaxID: 9606]

Protein attributes

Sequence length107 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Host membrane; Single-pass membrane protein Potential.

Sequence similarities

Belongs to the rotavirus B NSP1-1 family.

Ontologies

Keywords
   Cellular componentHost membrane
Membrane
   DomainTransmembrane
Transmembrane helix
Gene Ontology (GO)
   Cellular_componenthost cell membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

integral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 107107Non-structural protein 1, peptide 1
PRO_0000369854

Regions

Transmembrane39 – 5921Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
Q86198 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 55EDB46D92B387E8

FASTA10711,726
        10         20         30         40         50         60 
MGNRQSSAQL NSHLTHINSQ NSNLFISDSK TAVFHTQHIL LAAGVGIIAT LLVLLLCSCV 

        70         80         90        100 
LNCYLCRRLK RTNGVSSLLE RNLRQNGSSA KIYVKPVMQS STIIEEA 

« Hide

References

[1]"Primary Identification of the sitth RNA segment of the group B rotavirus ADRV."
Mackow E.R., Chen G., Werner R., Fay M.E., Tao H.
Submitted (SEP-1992) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
M91435 Genomic RNA. Translation: AAA47330.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameNSP1A_ROTGA
AccessionPrimary (citable) accession number: Q86198
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: November 1, 1996
Last modified: February 19, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families