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Q85FL3

- ACCD_ADICA

UniProt

Q85FL3 - ACCD_ADICA

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Protein

Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

Gene
accD
Organism
Adiantum capillus-veneris (Maidenhair fern)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at transcript leveli

Functioni

Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO2 group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA By similarity.UniRule annotation

Catalytic activityi

ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA.UniRule annotation

Cofactori

Binds 1 zinc ion per subunit By similarity.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi51 – 511Zinc By similarity
Metal bindingi54 – 541Zinc By similarity
Metal bindingi70 – 701Zinc By similarity
Metal bindingi73 – 731Zinc By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri51 – 7323C4-type By similarityAdd
BLAST

GO - Molecular functioni

  1. acetyl-CoA carboxylase activity Source: UniProtKB-HAMAP
  2. ATP binding Source: UniProtKB-KW
  3. zinc ion binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. fatty acid biosynthetic process Source: UniProtKB-HAMAP
  2. malonyl-CoA biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Ligase

Keywords - Biological processi

Fatty acid biosynthesis, Fatty acid metabolism, Lipid biosynthesis, Lipid metabolism

Keywords - Ligandi

ATP-binding, Metal-binding, Nucleotide-binding, Zinc

Enzyme and pathway databases

UniPathwayiUPA00655; UER00711.

Names & Taxonomyi

Protein namesi
Recommended name:
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic (EC:6.4.1.2)
Short name:
ACCase subunit beta
Short name:
Acetyl-CoA carboxylase carboxyltransferase subunit beta
Gene namesi
Name:accD
Encoded oniPlastid; Chloroplast
OrganismiAdiantum capillus-veneris (Maidenhair fern)
Taxonomic identifieri13818 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaMoniliformopsesPolypodiopsidacore leptosporangiate fernsPolypodialesPteridaceaeAdiantum

Subcellular locationi

Plastidchloroplast stroma By similarity UniRule annotation

GO - Cellular componenti

  1. acetyl-CoA carboxylase complex Source: InterPro
  2. chloroplast stroma Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 310310Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplasticUniRule annotationPRO_0000199777Add
BLAST

Interactioni

Subunit structurei

Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein, biotin carboxylase and 2 subunits each of ACCase subunit alpha and ACCase plastid-coded subunit beta (accD) By similarity.

Structurei

3D structure databases

ProteinModelPortaliQ85FL3.

Family & Domainsi

Sequence similaritiesi

Belongs to the AccD/PCCB family.

Zinc finger

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri51 – 7323C4-type By similarityAdd
BLAST

Keywords - Domaini

Zinc-finger

Family and domain databases

Gene3Di3.90.226.10. 1 hit.
HAMAPiMF_01395. AcetylCoA_CT_beta.
InterProiIPR000438. Acetyl_CoA_COase_Trfase_b_su.
IPR000022. Carboxyl_trans.
IPR029045. ClpP/crotonase-like_dom.
IPR011762. COA_CT_N.
[Graphical view]
PfamiPF01039. Carboxyl_trans. 1 hit.
[Graphical view]
PRINTSiPR01070. ACCCTRFRASEB.
SUPFAMiSSF52096. SSF52096. 1 hit.
TIGRFAMsiTIGR00515. accD. 1 hit.
PROSITEiPS50980. COA_CT_NTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q85FL3-1 [UniParc]FASTAAdd to Basket

« Hide

MVMSVINWFE DRQKFGGLIG AFLEEATRSS MTNERDRRIS VNANKGLWAR    50
CDNCGNMLYV KFLKQNRSVC EECGYHLSMS SMERIELLID PNTWIPLDED 100
MSARDILSFS DEDSYETRIL LSQEKTGLTD AVQTGIGYLN GTLIALGVMD 150
FHFMGGSMGS VVGEKITRLI EYATQRLLPL VLICASGGAR MQEGTLSLMQ 200
MAKISSVLQL YQVQNKLLYI SVLTYPTTGG VTASFGMLGD IIIAEPKAYI 250
AFAGKRVIEQ TLRQKIPDGF QAAESLFDNG LLDLIVPRNL LKGVLSEISG 300
LYLSVPYNKN 310
Length:310
Mass (Da):34,417
Last modified:August 16, 2004 - v2
Checksum:i2C5B38A8CDCB054E
GO

RNA editingi

The initiator methionine is created by RNA editing. The nonsense codon at position 260 is modified to a sense codon.1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY178864 Genomic DNA. Translation: AAP29400.2.
RefSeqiNP_848069.2. NC_004766.1.

Genome annotation databases

GeneIDi807410.

Keywords - Coding sequence diversityi

RNA editing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY178864 Genomic DNA. Translation: AAP29400.2 .
RefSeqi NP_848069.2. NC_004766.1.

3D structure databases

ProteinModelPortali Q85FL3.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 807410.

Enzyme and pathway databases

UniPathwayi UPA00655 ; UER00711 .

Family and domain databases

Gene3Di 3.90.226.10. 1 hit.
HAMAPi MF_01395. AcetylCoA_CT_beta.
InterProi IPR000438. Acetyl_CoA_COase_Trfase_b_su.
IPR000022. Carboxyl_trans.
IPR029045. ClpP/crotonase-like_dom.
IPR011762. COA_CT_N.
[Graphical view ]
Pfami PF01039. Carboxyl_trans. 1 hit.
[Graphical view ]
PRINTSi PR01070. ACCCTRFRASEB.
SUPFAMi SSF52096. SSF52096. 1 hit.
TIGRFAMsi TIGR00515. accD. 1 hit.
PROSITEi PS50980. COA_CT_NTER. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Complete nucleotide sequence of the chloroplast genome from a leptosporangiate fern, Adiantum capillus-veneris L."
    Wolf P.G., Rowe C.A., Sinclair R.B., Hasebe M.
    DNA Res. 10:59-65(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "High levels of RNA editing in a vascular plant chloroplast genome: analysis of transcripts from the fern Adiantum capillus-veneris."
    Wolf P.G., Rowe C.A., Hasebe M.
    Gene 339:89-97(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], RNA EDITING.
    Tissue: Frond.

Entry informationi

Entry nameiACCD_ADICA
AccessioniPrimary (citable) accession number: Q85FL3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 5, 2005
Last sequence update: August 16, 2004
Last modified: June 11, 2014
This is version 55 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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