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Protein

Gag polyprotein

Gene

gag

Organism
Bovine leukemia virus (BLV)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Gag polyproteinSAAS annotation
Gene namesi
Name:gagImported
OrganismiBovine leukemia virus (BLV)Imported
Taxonomic identifieri11901 [NCBI]
Taxonomic lineageiVirusesRetro-transcribing virusesRetroviridaeOrthoretrovirinaeDeltaretrovirus
Virus hostiBos taurus (Bovine) [TaxID: 9913]

Subcellular locationi

  • Virion SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Capsid proteinSAAS annotation, Virion

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini348 – 36215CCHC-typeInterPro annotationAdd
BLAST

Family and domain databases

Gene3Di1.10.1200.30. 1 hit.
1.10.185.10. 1 hit.
1.10.375.10. 1 hit.
4.10.60.10. 1 hit.
InterProiIPR003139. D_retro_matrix.
IPR000721. Gag_p24.
IPR008916. Retrov_capsid_C.
IPR008919. Retrov_capsid_N.
IPR010999. Retrovr_matrix.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF02228. Gag_p19. 1 hit.
PF00607. Gag_p24. 1 hit.
PF00098. zf-CCHC. 1 hit.
[Graphical view]
SMARTiSM00343. ZnF_C2HC. 2 hits.
[Graphical view]
SUPFAMiSSF47353. SSF47353. 1 hit.
SSF47836. SSF47836. 1 hit.
SSF47943. SSF47943. 1 hit.
SSF57756. SSF57756. 1 hit.
PROSITEiPS50158. ZF_CCHC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q85490-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGNSPSYNPP AGISPSDWLN LRQSAQRLNP RPSPSDFTDL KNYIHWFHKT
60 70 80 90 100
QKKPWTFTSG GPASCPPGKF GRVPLVLATL NEVLSNDEGA PGASAPEEQP
110 120 130 140 150
PPYDPPAILP IISEGNRNRH RAWALRELQD IKKEIENKAP GSQVWIQTLR
160 170 180 190 200
LAILQADPTP ADLEQLCQYI ASPVDQTAHM TSLTAAIAAA EAANTLQGFN
210 220 230 240 250
PQNGTLTQQS AQPNAGDLRS QYQNLWLQAW KNLPTRPSVQ PWSTIVQGPA
260 270 280 290 300
ESYVEFVNRL QISLADNLPD GVPKEPIIDS LSYANANKEC QQILQGRGLV
310 320 330 340 350
AAPVGQKLQA CAHWAPKVKQ PAILVHTPGP KMPGPRQPAP KRPPPGPCYR
360 370 380 390
CLKEGHWARD CPTKTTGPPP GPCPICKDPS HWKRDCPTLK SKN
Length:393
Mass (Da):42,971
Last modified:November 1, 1996 - v1
Checksum:i135E4123082C1620
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M10987 Genomic RNA. Translation: AAA42794.1.
AF033818 Genomic RNA. Translation: AAC82585.1.
PIRiS29356.
RefSeqiNP_056897.1. NC_001414.1.

Genome annotation databases

GeneIDi2760846.
KEGGivg:2760846.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M10987 Genomic RNA. Translation: AAA42794.1.
AF033818 Genomic RNA. Translation: AAC82585.1.
PIRiS29356.
RefSeqiNP_056897.1. NC_001414.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi2760846.
KEGGivg:2760846.

Family and domain databases

Gene3Di1.10.1200.30. 1 hit.
1.10.185.10. 1 hit.
1.10.375.10. 1 hit.
4.10.60.10. 1 hit.
InterProiIPR003139. D_retro_matrix.
IPR000721. Gag_p24.
IPR008916. Retrov_capsid_C.
IPR008919. Retrov_capsid_N.
IPR010999. Retrovr_matrix.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF02228. Gag_p19. 1 hit.
PF00607. Gag_p24. 1 hit.
PF00098. zf-CCHC. 1 hit.
[Graphical view]
SMARTiSM00343. ZnF_C2HC. 2 hits.
[Graphical view]
SUPFAMiSSF47353. SSF47353. 1 hit.
SSF47836. SSF47836. 1 hit.
SSF47943. SSF47943. 1 hit.
SSF57756. SSF57756. 1 hit.
PROSITEiPS50158. ZF_CCHC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ85490_BLV
AccessioniPrimary (citable) accession number: Q85490
Secondary accession number(s): O92811
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.