Reviewed,
UniProtKB/Swiss-Prot Q852M1 (ALDO2_ORYSJ)
Last modified
November 25, 2008.
Version 36.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Probable aldehyde oxidase 2 Short name=AO-2 EC=1.2.3.1 | ||||
| Gene names |
| ||||
| Organism | Oryza sativa subsp. japonica (Rice) | ||||
| Taxonomic identifier | 39947 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza |
Protein attributes
| Sequence length | 1355 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Catalytic activity | An aldehyde + H(2)O + O(2) = a carboxylic acid + H(2)O(2). |
| Cofactor | Binds 2 2Fe-2S clusters By similarity. FAD By similarity. Molybdopterin By similarity. |
| Subunit structure | Aldehyde oxidases (AO) are homo- and heterodimers of AO subunits By similarity. |
| Sequence similarities | Belongs to the xanthine dehydrogenase family. Contains 1 2Fe-2S ferredoxin-type domain. Contains 1 FAD-binding PCMH-type domain. |
| Sequence caution | The sequence AK100342 differs from that shown. Reason: Frameshift at position 683. |
Ontologies
Keywords | |
|---|---|
| Biological process | Abscisic acid biosynthesis Auxin biosynthesis |
| Ligand | 2Fe-2S FAD Flavoprotein Iron Iron-sulfur Metal-binding Molybdenum NAD |
| Molecular function | Oxidoreductase |
Gene Ontology (GO) | |
| Biological process | abscisic acid biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW auxin biosynthetic processInferred from electronic annotation. Source: UniProtKB-KW oxidation reductionInferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | 2 iron, 2 sulfur cluster binding Inferred from electronic annotation. Source: UniProtKB-KW FAD bindingInferred from electronic annotation. Source: InterPro aldehyde oxidase activityInferred from electronic annotation. Source: EC electron carrier activityInferred from electronic annotation. Source: InterPro iron ion bindingInferred from electronic annotation. Source: InterPro molybdenum ion bindingInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1355 | 1355 | Probable aldehyde oxidase 2 | PRO_0000247646 | |||||
Regions | |||||||||
| Domain | 9 – 96 | 88 | 2Fe-2S ferredoxin-type | ||||||
| Domain | 244 – 422 | 179 | FAD-binding PCMH-type | ||||||
Sites | |||||||||
| Metal binding | 48 | 1 | Iron-sulfur (2Fe-2S) By similarity | ||||||
| Metal binding | 53 | 1 | Iron-sulfur (2Fe-2S) By similarity | ||||||
| Metal binding | 56 | 1 | Iron-sulfur (2Fe-2S) By similarity | ||||||
| Metal binding | 78 | 1 | Iron-sulfur (2Fe-2S) By similarity | ||||||
Sequences
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References
| [1] | "Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species." The rice chromosome 3 sequencing consortium Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S.  Jackson S.Genome Res. 15:1284-1291(2005) [PubMed: 16109971] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare. |
| [2] | "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice." The rice full-length cDNA consortium Science 301:376-379(2003) [PubMed: 12869764] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Nipponbare. |
Cross-references
Sequence databases | |
|---|---|
| AC087096 Genomic DNA. Translation: AAO24920.1. AK100342 mRNA. No translation available. | |
3D structure databases | |
| HSSP | HSSP built from PDB template 1FO4 based on UniProtKB P80457. |
| ModBase | Search... |
Organism-specific databases | |
| Gramene | Q852M1. |
Family and domain databases | |
| InterPro | IPR002888. 2Fe-2S_bd. IPR006058. 2Fe2S_fd_BS. IPR000674. Ald_Oxase/Xan_DHase_a/b. IPR016208. Ald_Oxase/xanthine_DHase. IPR008274. AldOxase/xan_DHase_Mopterin-bd. IPR005107. CO_DHase_flav_C. IPR016169. CO_DHase_flavot_FAD-bd_sub2. IPR001041. Ferredoxin. IPR002346. Mopterin_DHase_FAD-bd. [Graphical view] |
| Gene3D | G3DSA:3.30.365.10. Ald_xan_DH_mo_bd. 2 hits. G3DSA:3.90.1170.50. Aldxan_DH_hamm. 1 hit. G3DSA:3.30.390.50. CO_DH_flav_C. 1 hit. G3DSA:3.30.465.10. CO_DH_flavoprot_FAD-bd_sub2. 1 hit. |
| Pfam | PF01315. Ald_Xan_dh_C. 1 hit. PF02738. Ald_Xan_dh_C2. 1 hit. PF03450. CO_deh_flav_C. 1 hit. PF00941. FAD_binding_5. 1 hit. PF00111. Fer2. 1 hit. PF01799. Fer2_2. 1 hit. [Graphical view] |
| PIRSF | PIRSF000127. Xanthine_DH. 1 hit. |
| ProDom | PD186071. 2Fe-2S_bind. 1 hit. [Graphical view] [Entries sharing at least one domain] |
| PROSITE | PS00197. 2FE2S_FER_1. 1 hit. PS51085. 2FE2S_FER_2. 1 hit. PS51387. FAD_PCMH. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | ALDO2_ORYSJ | ||||||||
| Accession | Primary (citable) accession number: Q852M1 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | PPAP (Plant Proteome Annotation Project) | ||||||||
Relevant documents
| Oryza sativa (rice) Index of Oryza sativa entries and their corresponding gene designations |
| SIMILARITY comments Index of protein domains and families |
