SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q84YK8

- LOXC2_ORYSJ

UniProt

Q84YK8 - LOXC2_ORYSJ

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Probable lipoxygenase 8, chloroplastic

Gene
CM-LOX2, Os08g0509100, LOC_Os08g39850, B1168A08.28-1, B1168A08.28-2, OSJNBa0016N23.103-1, OSJNBa0016N23.103-2
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. It catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure By similarity.

Catalytic activityi

Linoleate + O2 = (9Z,11E,13S)-13-hydroperoxyoctadeca-9,11-dienoate.
Alpha-linolenate + O2 = (9Z,11E,13S,15Z)-13-hydroperoxyoctadeca-9,11,15-trienoate.

Cofactori

Binds 1 iron ion per subunit. Iron is tightly bound By similarity.

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi598 – 5981Iron; catalytic By similarity
Metal bindingi603 – 6031Iron; catalytic By similarity
Metal bindingi790 – 7901Iron; catalytic By similarity
Metal bindingi794 – 7941Iron; catalytic By similarity
Metal bindingi941 – 9411Iron; via carboxylate; catalytic By similarity

GO - Molecular functioni

  1. iron ion binding Source: InterPro
  2. linoleate 13S-lipoxygenase activity Source: UniProtKB-EC

GO - Biological processi

  1. oxylipin biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Dioxygenase, Oxidoreductase

Keywords - Biological processi

Fatty acid biosynthesis, Fatty acid metabolism, Lipid biosynthesis, Lipid metabolism, Oxylipin biosynthesis

Keywords - Ligandi

Iron, Metal-binding

Enzyme and pathway databases

UniPathwayiUPA00382.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable lipoxygenase 8, chloroplastic (EC:1.13.11.12)
Gene namesi
Name:CM-LOX2
Ordered Locus Names:Os08g0509100, LOC_Os08g39850
ORF Names:B1168A08.28-1, B1168A08.28-2, OSJNBa0016N23.103-1, OSJNBa0016N23.103-2
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 8

Organism-specific databases

GrameneiQ84YK8.

Subcellular locationi

Plastidchloroplast Reviewed prediction

GO - Cellular componenti

  1. chloroplast Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 6767Chloroplast Reviewed predictionAdd
BLAST
Chaini68 – 941874Probable lipoxygenase 8, chloroplasticPRO_0000018328Add
BLAST

Proteomic databases

PRIDEiQ84YK8.

Structurei

3D structure databases

ProteinModelPortaliQ84YK8.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini100 – 236137PLATAdd
BLAST
Domaini242 – 941700LipoxygenaseAdd
BLAST

Sequence similaritiesi

Belongs to the lipoxygenase family.
Contains 1 PLAT domain.

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiNOG69653.
HOGENOMiHOG000230469.
KOiK00454.
OMAiTEMFLED.

Family and domain databases

Gene3Di2.60.60.20. 1 hit.
4.10.372.10. 1 hit.
InterProiIPR008976. Lipase_LipOase.
IPR000907. LipOase.
IPR013819. LipOase_C.
IPR020834. LipOase_CS.
IPR020833. LipOase_Fe_BS.
IPR001246. LipOase_pln.
IPR027433. Lipoxygenase_domain_3.
IPR001024. PLAT/LH2_dom.
[Graphical view]
PANTHERiPTHR11771. PTHR11771. 1 hit.
PfamiPF00305. Lipoxygenase. 1 hit.
PF01477. PLAT. 1 hit.
[Graphical view]
PRINTSiPR00087. LIPOXYGENASE.
PR00468. PLTLPOXGNASE.
SMARTiSM00308. LH2. 1 hit.
[Graphical view]
SUPFAMiSSF48484. SSF48484. 1 hit.
SSF49723. SSF49723. 1 hit.
PROSITEiPS00711. LIPOXYGENASE_1. 1 hit.
PS00081. LIPOXYGENASE_2. 1 hit.
PS51393. LIPOXYGENASE_3. 1 hit.
PS50095. PLAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q84YK8-1 [UniParc]FASTAAdd to Basket

« Hide

MLRPQLNPSS SHHHTTTTSS SSSTQLYFAS SSCIASLRRP SPPSLIAGAG    50
CRTTRRRQQG RQRVVVRCAS SSAASSASEA ARRGTGSSDM APAAVVKVKA 100
VATIKVTVEG LLNSLRPSKA IDNIRDLIGR SLFLELVSSE LEAKTGKKKA 150
TVHSYAHKVD DDDHGVVTYE ADFDVPTGFG PIGAVVVTNE LGQEMFLEDL 200
NLTAGDGAGN STVLPIRCNS WVQPKSSIDE GTPGKRIFFA KAYLPGQTPA 250
GLRSYREEDL KQKRGNGAGQ READDRVYDY DVYNDLGNPD SNGDLARPVL 300
GGSKQFPYPR RCRTGRPPSK KDPKSETRKG NVYVPRDEEF SEVKNAQFLL 350
KTLQSVLHAA VPAAQSALID NLSLNLPFPS FFVIDKLFED GVELPGVEKL 400
GFLHSIVPRL LELLRDSPGD KILLFDTPAN VQKDKFAWLR DEEFARETLA 450
GINPYAIELV REFPLKSKLD PAVYGPAESA ITADLLEEQM RRVMTVEEAI 500
SQKRLFMLDF HDLFLPYVHK IRSLKHTTMY GSRTIFFLTD DGTLRLLAIE 550
LTRPASPSQP QWRQVFTPST DTTKSWLWRM AKAHVRAHDA GHHELITHWL 600
RTHCAVEPYI IAANRQLSEM HPIYQLLHPH FRYTMRINAL ARSRLISAAG 650
IIELSFSPQK YSMELSSVAY DKLWRFDMEA LPADLVRRGM AEEDPTAEHG 700
LRLAIEDYPF ANDGLLIWDA IKTWVQAYVA RFYPDADSVA GDEELQAFWT 750
EVRTKGHGDK KDAPWWPKLD SPESLAHTLT TIVWVAAAHH AAVNFGQYDF 800
GGYFPNRPSI ARTVMPVEEP VDGAAMERFL DNPDQALREC FPSQVQATVV 850
MAVLDVLSTH STDEEYLGGE QTRPWNSDAA VQAAYAGFTA RLKEIEGVID 900
GRNKDRKLKN RCGAGILPYQ LMKPFSDAGV TGMGIPNSTS I 941
Length:941
Mass (Da):104,494
Last modified:June 1, 2003 - v1
Checksum:iBE3C7BA515137C32
GO

Sequence cautioni

The sequence BAD10669.1 differs from that shown. Reason: Erroneous gene model prediction.
The sequence BAD10729.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti590 – 5901A → T in AAD42043. 1 Publication
Sequence conflicti639 – 6391A → T in AAD42043. 1 Publication
Sequence conflicti711 – 7111A → T in AAD42043. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP005816 Genomic DNA. Translation: BAD10668.1.
AP005816 Genomic DNA. Translation: BAD10669.1. Sequence problems.
AP006049 Genomic DNA. Translation: BAC57390.1.
AP006049 Genomic DNA. Translation: BAD10729.1. Sequence problems.
AF095896 mRNA. Translation: AAD42043.1.
RefSeqiNP_001062200.1. NM_001068735.1.
UniGeneiOs.13008.

Genome annotation databases

EnsemblPlantsiOS08T0509100-01; OS08T0509100-01; OS08G0509100.
GeneIDi4345994.
KEGGiosa:4345994.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP005816 Genomic DNA. Translation: BAD10668.1 .
AP005816 Genomic DNA. Translation: BAD10669.1 . Sequence problems.
AP006049 Genomic DNA. Translation: BAC57390.1 .
AP006049 Genomic DNA. Translation: BAD10729.1 . Sequence problems.
AF095896 mRNA. Translation: AAD42043.1 .
RefSeqi NP_001062200.1. NM_001068735.1.
UniGenei Os.13008.

3D structure databases

ProteinModelPortali Q84YK8.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi Q84YK8.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS08T0509100-01 ; OS08T0509100-01 ; OS08G0509100 .
GeneIDi 4345994.
KEGGi osa:4345994.

Organism-specific databases

Gramenei Q84YK8.

Phylogenomic databases

eggNOGi NOG69653.
HOGENOMi HOG000230469.
KOi K00454.
OMAi TEMFLED.

Enzyme and pathway databases

UniPathwayi UPA00382 .

Family and domain databases

Gene3Di 2.60.60.20. 1 hit.
4.10.372.10. 1 hit.
InterProi IPR008976. Lipase_LipOase.
IPR000907. LipOase.
IPR013819. LipOase_C.
IPR020834. LipOase_CS.
IPR020833. LipOase_Fe_BS.
IPR001246. LipOase_pln.
IPR027433. Lipoxygenase_domain_3.
IPR001024. PLAT/LH2_dom.
[Graphical view ]
PANTHERi PTHR11771. PTHR11771. 1 hit.
Pfami PF00305. Lipoxygenase. 1 hit.
PF01477. PLAT. 1 hit.
[Graphical view ]
PRINTSi PR00087. LIPOXYGENASE.
PR00468. PLTLPOXGNASE.
SMARTi SM00308. LH2. 1 hit.
[Graphical view ]
SUPFAMi SSF48484. SSF48484. 1 hit.
SSF49723. SSF49723. 1 hit.
PROSITEi PS00711. LIPOXYGENASE_1. 1 hit.
PS00081. LIPOXYGENASE_2. 1 hit.
PS51393. LIPOXYGENASE_3. 1 hit.
PS50095. PLAT. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "Purification and cDNA cloning of two rice lipoxygenases induced by blast fungus."
    Peng Y., Hou Z.
    Submitted (OCT-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 259-941.
    Strain: cv. Aichiasahi.
    Tissue: Seedling leaf.

Entry informationi

Entry nameiLOXC2_ORYSJ
AccessioniPrimary (citable) accession number: Q84YK8
Secondary accession number(s): Q7EXZ6, Q9XHM6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: June 1, 2003
Last modified: May 14, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi