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Q84YK7

- BGL27_ORYSJ

UniProt

Q84YK7 - BGL27_ORYSJ

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Protein

Beta-glucosidase 27

Gene
BGLU27, Os08g0509200, LOC_Os08g39860, B1168A08.29-1, B1168A08.29-2, OSJNBa0016N23.104-1, OSJNBa0016N23.104-2
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei43 – 431Substrate By similarity
Binding sitei146 – 1461Substrate By similarity
Binding sitei191 – 1911Substrate By similarity
Active sitei192 – 1921Proton donor By similarity
Binding sitei335 – 3351Substrate By similarity
Active sitei407 – 4071Nucleophile By similarity
Binding sitei456 – 4561Substrate By similarity

GO - Molecular functioni

  1. beta-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-glucosidase 27 (EC:3.2.1.21)
Short name:
Os8bglu27
Gene namesi
Name:BGLU27
Ordered Locus Names:Os08g0509200, LOC_Os08g39860
ORF Names:B1168A08.29-1, B1168A08.29-2, OSJNBa0016N23.104-1, OSJNBa0016N23.104-2
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 8

Organism-specific databases

GrameneiQ84YK7.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919 Reviewed predictionAdd
BLAST
Chaini20 – 499480Beta-glucosidase 27PRO_0000390344Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi111 – 1111N-linked (GlcNAc...) Reviewed prediction
Disulfide bondi211 ↔ 219 By similarity
Glycosylationi361 – 3611N-linked (GlcNAc...) Reviewed prediction
Glycosylationi408 – 4081N-linked (GlcNAc...) Reviewed prediction
Glycosylationi414 – 4141N-linked (GlcNAc...) Reviewed prediction
Glycosylationi415 – 4151N-linked (GlcNAc...) Reviewed prediction

Keywords - PTMi

Disulfide bond, Glycoprotein

Structurei

3D structure databases

ProteinModelPortaliQ84YK7.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni463 – 4642Substrate binding By similarity

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG2723.
HOGENOMiHOG000088630.
KOiK01188.
OMAiYIVGHHE.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q84YK7-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

MRWLLLALFL VALVSNGAAV HGAFNRFSFP EDFIFGTGSA AYQYEGAVNE    50
GGRGPSIWDT YAHIPGKVED GSNGDVAVDF YHRYKEDLNF VTDMNMDAFR 100
FSIAWSRILP NGTISGGINK EGIAFYNSLI NEVISRGLKP FVTIFHFDTP 150
QALEDKYRSF LSENIVKDFV DYADVCFREF GDRVKSWNTF NEPMIFCAGG 200
YGSGTKAPGR CSPYVSKKCA PGDSGNEPYV AGHNLLLAHA EAVRLYRQKY 250
QATQKGQIGI TQVSHWFVPY SDAAADKHAV RRSLDFMYGW FMDPIVFGDY 300
PGTMRKLVGD RLPKFTAEQS ELVKGSYDFI GLNYYTTNYA KSVLRRPSKL 350
KPAYATDNWV NQTAYRNGVP IGPPAFTKIF FTYAPGLREL LLYTKRKYND 400
PDIYIAENGT DEANNSTIPI AEALKDDNRI SFHYQHLRFT QLAIKEGVKV 450
KGYFTWTFMD DFEWGDGYTG RFGLIYVDRE TLKRYRKKSS YWFADFLKR 499
Length:499
Mass (Da):56,804
Last modified:June 1, 2003 - v1
Checksum:iC49FA55790C20566
GO
Isoform 2 (identifier: Q84YK7-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     446-499: Missing.

Note: No experimental confirmation available.

Show »
Length:445
Mass (Da):50,161
Checksum:iDD982A86EACFCAA4
GO

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei446 – 49954Missing in isoform 2. VSP_038511Add
BLAST

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti401 – 4011P → T in AK067001. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP006049 Genomic DNA. Translation: BAC57391.1.
AP006049 Genomic DNA. Translation: BAD10730.1.
AP005816 Genomic DNA. Translation: BAD10670.1.
AP005816 Genomic DNA. Translation: BAD10671.1.
AP008214 Genomic DNA. Translation: BAF24115.1.
AK067001 mRNA. No translation available.
AK120430 mRNA. No translation available.
RefSeqiNP_001062201.1. NM_001068736.1. [Q84YK7-1]
UniGeneiOs.17880.

Genome annotation databases

EnsemblPlantsiOS08T0509200-01; OS08T0509200-01; OS08G0509200. [Q84YK7-1]
GeneIDi4345995.
KEGGiosa:4345995.

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP006049 Genomic DNA. Translation: BAC57391.1 .
AP006049 Genomic DNA. Translation: BAD10730.1 .
AP005816 Genomic DNA. Translation: BAD10670.1 .
AP005816 Genomic DNA. Translation: BAD10671.1 .
AP008214 Genomic DNA. Translation: BAF24115.1 .
AK067001 mRNA. No translation available.
AK120430 mRNA. No translation available.
RefSeqi NP_001062201.1. NM_001068736.1. [Q84YK7-1 ]
UniGenei Os.17880.

3D structure databases

ProteinModelPortali Q84YK7.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS08T0509200-01 ; OS08T0509200-01 ; OS08G0509200 . [Q84YK7-1 ]
GeneIDi 4345995.
KEGGi osa:4345995.

Organism-specific databases

Gramenei Q84YK7.

Phylogenomic databases

eggNOGi COG2723.
HOGENOMi HOG000088630.
KOi K01188.
OMAi YIVGHHE.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10353. PTHR10353. 1 hit.
Pfami PF00232. Glyco_hydro_1. 1 hit.
[Graphical view ]
PRINTSi PR00131. GLHYDRLASE1.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
    Strain: cv. Nipponbare.
  4. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
    Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
    BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiBGL27_ORYSJ
AccessioniPrimary (citable) accession number: Q84YK7
Secondary accession number(s): Q7EXZ5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 2009
Last sequence update: June 1, 2003
Last modified: May 14, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi