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Q84YK7

- BGL27_ORYSJ

UniProt

Q84YK7 - BGL27_ORYSJ

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Protein

Beta-glucosidase 27

Gene

BGLU27

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei43 – 431SubstrateBy similarity
Binding sitei146 – 1461SubstrateBy similarity
Binding sitei191 – 1911SubstrateBy similarity
Active sitei192 – 1921Proton donorBy similarity
Binding sitei335 – 3351SubstrateBy similarity
Active sitei407 – 4071NucleophileBy similarity
Binding sitei456 – 4561SubstrateBy similarity

GO - Molecular functioni

  1. beta-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-glucosidase 27 (EC:3.2.1.21)
Short name:
Os8bglu27
Gene namesi
Name:BGLU27
Ordered Locus Names:Os08g0509200, LOC_Os08g39860
ORF Names:B1168A08.29-1, B1168A08.29-2, OSJNBa0016N23.104-1, OSJNBa0016N23.104-2
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 8

Organism-specific databases

GrameneiQ84YK7.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919Sequence AnalysisAdd
BLAST
Chaini20 – 499480Beta-glucosidase 27PRO_0000390344Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi111 – 1111N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi211 ↔ 219By similarity
Glycosylationi361 – 3611N-linked (GlcNAc...)Sequence Analysis
Glycosylationi408 – 4081N-linked (GlcNAc...)Sequence Analysis
Glycosylationi414 – 4141N-linked (GlcNAc...)Sequence Analysis
Glycosylationi415 – 4151N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Disulfide bond, Glycoprotein

Expressioni

Gene expression databases

ExpressionAtlasiQ84YK7. baseline.

Structurei

3D structure databases

ProteinModelPortaliQ84YK7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni463 – 4642Substrate bindingBy similarity

Sequence similaritiesi

Belongs to the glycosyl hydrolase 1 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG2723.
HOGENOMiHOG000088630.
InParanoidiQ84YK7.
KOiK01188.
OMAiYIVGHHE.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q84YK7-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MRWLLLALFL VALVSNGAAV HGAFNRFSFP EDFIFGTGSA AYQYEGAVNE
60 70 80 90 100
GGRGPSIWDT YAHIPGKVED GSNGDVAVDF YHRYKEDLNF VTDMNMDAFR
110 120 130 140 150
FSIAWSRILP NGTISGGINK EGIAFYNSLI NEVISRGLKP FVTIFHFDTP
160 170 180 190 200
QALEDKYRSF LSENIVKDFV DYADVCFREF GDRVKSWNTF NEPMIFCAGG
210 220 230 240 250
YGSGTKAPGR CSPYVSKKCA PGDSGNEPYV AGHNLLLAHA EAVRLYRQKY
260 270 280 290 300
QATQKGQIGI TQVSHWFVPY SDAAADKHAV RRSLDFMYGW FMDPIVFGDY
310 320 330 340 350
PGTMRKLVGD RLPKFTAEQS ELVKGSYDFI GLNYYTTNYA KSVLRRPSKL
360 370 380 390 400
KPAYATDNWV NQTAYRNGVP IGPPAFTKIF FTYAPGLREL LLYTKRKYND
410 420 430 440 450
PDIYIAENGT DEANNSTIPI AEALKDDNRI SFHYQHLRFT QLAIKEGVKV
460 470 480 490
KGYFTWTFMD DFEWGDGYTG RFGLIYVDRE TLKRYRKKSS YWFADFLKR
Length:499
Mass (Da):56,804
Last modified:June 1, 2003 - v1
Checksum:iC49FA55790C20566
GO
Isoform 2 (identifier: Q84YK7-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     446-499: Missing.

Note: No experimental confirmation available.

Show »
Length:445
Mass (Da):50,161
Checksum:iDD982A86EACFCAA4
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti401 – 4011P → T in AK067001. (PubMed:12869764)Curated

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei446 – 49954Missing in isoform 2. 1 PublicationVSP_038511Add
BLAST

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP006049 Genomic DNA. Translation: BAC57391.1.
AP006049 Genomic DNA. Translation: BAD10730.1.
AP005816 Genomic DNA. Translation: BAD10670.1.
AP005816 Genomic DNA. Translation: BAD10671.1.
AP008214 Genomic DNA. Translation: BAF24115.1.
AK067001 mRNA. No translation available.
AK120430 mRNA. No translation available.
RefSeqiNP_001062201.1. NM_001068736.1. [Q84YK7-1]
UniGeneiOs.17880.

Genome annotation databases

EnsemblPlantsiOS08T0509200-01; OS08T0509200-01; OS08G0509200. [Q84YK7-1]
GeneIDi4345995.
KEGGiosa:4345995.

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP006049 Genomic DNA. Translation: BAC57391.1 .
AP006049 Genomic DNA. Translation: BAD10730.1 .
AP005816 Genomic DNA. Translation: BAD10670.1 .
AP005816 Genomic DNA. Translation: BAD10671.1 .
AP008214 Genomic DNA. Translation: BAF24115.1 .
AK067001 mRNA. No translation available.
AK120430 mRNA. No translation available.
RefSeqi NP_001062201.1. NM_001068736.1. [Q84YK7-1 ]
UniGenei Os.17880.

3D structure databases

ProteinModelPortali Q84YK7.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS08T0509200-01 ; OS08T0509200-01 ; OS08G0509200 . [Q84YK7-1 ]
GeneIDi 4345995.
KEGGi osa:4345995.

Organism-specific databases

Gramenei Q84YK7.

Phylogenomic databases

eggNOGi COG2723.
HOGENOMi HOG000088630.
InParanoidi Q84YK7.
KOi K01188.
OMAi YIVGHHE.

Gene expression databases

ExpressionAtlasi Q84YK7. baseline.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10353. PTHR10353. 1 hit.
Pfami PF00232. Glyco_hydro_1. 1 hit.
[Graphical view ]
PRINTSi PR00131. GLHYDRLASE1.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
    Strain: cv. Nipponbare.
  4. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
    Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
    BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiBGL27_ORYSJ
AccessioniPrimary (citable) accession number: Q84YK7
Secondary accession number(s): Q7EXZ5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 2009
Last sequence update: June 1, 2003
Last modified: October 29, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3