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Q84YK7

- BGL27_ORYSJ

UniProt

Q84YK7 - BGL27_ORYSJ

Protein

Beta-glucosidase 27

Gene

BGLU27

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 71 (01 Oct 2014)
      Sequence version 1 (01 Jun 2003)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei43 – 431SubstrateBy similarity
    Binding sitei146 – 1461SubstrateBy similarity
    Binding sitei191 – 1911SubstrateBy similarity
    Active sitei192 – 1921Proton donorBy similarity
    Binding sitei335 – 3351SubstrateBy similarity
    Active sitei407 – 4071NucleophileBy similarity
    Binding sitei456 – 4561SubstrateBy similarity

    GO - Molecular functioni

    1. beta-glucosidase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Protein family/group databases

    CAZyiGH1. Glycoside Hydrolase Family 1.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-glucosidase 27 (EC:3.2.1.21)
    Short name:
    Os8bglu27
    Gene namesi
    Name:BGLU27
    Ordered Locus Names:Os08g0509200, LOC_Os08g39860
    ORF Names:B1168A08.29-1, B1168A08.29-2, OSJNBa0016N23.104-1, OSJNBa0016N23.104-2
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 8

    Organism-specific databases

    GrameneiQ84YK7.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 1919Sequence AnalysisAdd
    BLAST
    Chaini20 – 499480Beta-glucosidase 27PRO_0000390344Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi111 – 1111N-linked (GlcNAc...)Sequence Analysis
    Disulfide bondi211 ↔ 219By similarity
    Glycosylationi361 – 3611N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi408 – 4081N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi414 – 4141N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi415 – 4151N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Disulfide bond, Glycoprotein

    Structurei

    3D structure databases

    ProteinModelPortaliQ84YK7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni463 – 4642Substrate bindingBy similarity

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 1 family.Curated

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG2723.
    HOGENOMiHOG000088630.
    KOiK01188.
    OMAiYIVGHHE.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10353. PTHR10353. 1 hit.
    PfamiPF00232. Glyco_hydro_1. 1 hit.
    [Graphical view]
    PRINTSiPR00131. GLHYDRLASE1.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view]

    Sequences (2)i

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    This entry describes 2 isoformsi produced by alternative splicing. Align

    Isoform 1 (identifier: Q84YK7-1) [UniParc]FASTAAdd to Basket

    This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

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    MRWLLLALFL VALVSNGAAV HGAFNRFSFP EDFIFGTGSA AYQYEGAVNE    50
    GGRGPSIWDT YAHIPGKVED GSNGDVAVDF YHRYKEDLNF VTDMNMDAFR 100
    FSIAWSRILP NGTISGGINK EGIAFYNSLI NEVISRGLKP FVTIFHFDTP 150
    QALEDKYRSF LSENIVKDFV DYADVCFREF GDRVKSWNTF NEPMIFCAGG 200
    YGSGTKAPGR CSPYVSKKCA PGDSGNEPYV AGHNLLLAHA EAVRLYRQKY 250
    QATQKGQIGI TQVSHWFVPY SDAAADKHAV RRSLDFMYGW FMDPIVFGDY 300
    PGTMRKLVGD RLPKFTAEQS ELVKGSYDFI GLNYYTTNYA KSVLRRPSKL 350
    KPAYATDNWV NQTAYRNGVP IGPPAFTKIF FTYAPGLREL LLYTKRKYND 400
    PDIYIAENGT DEANNSTIPI AEALKDDNRI SFHYQHLRFT QLAIKEGVKV 450
    KGYFTWTFMD DFEWGDGYTG RFGLIYVDRE TLKRYRKKSS YWFADFLKR 499
    Length:499
    Mass (Da):56,804
    Last modified:June 1, 2003 - v1
    Checksum:iC49FA55790C20566
    GO
    Isoform 2 (identifier: Q84YK7-2) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         446-499: Missing.

    Note: No experimental confirmation available.

    Show »
    Length:445
    Mass (Da):50,161
    Checksum:iDD982A86EACFCAA4
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti401 – 4011P → T in AK067001. (PubMed:12869764)Curated

    Alternative sequence

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Alternative sequencei446 – 49954Missing in isoform 2. 1 PublicationVSP_038511Add
    BLAST

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP006049 Genomic DNA. Translation: BAC57391.1.
    AP006049 Genomic DNA. Translation: BAD10730.1.
    AP005816 Genomic DNA. Translation: BAD10670.1.
    AP005816 Genomic DNA. Translation: BAD10671.1.
    AP008214 Genomic DNA. Translation: BAF24115.1.
    AK067001 mRNA. No translation available.
    AK120430 mRNA. No translation available.
    RefSeqiNP_001062201.1. NM_001068736.1. [Q84YK7-1]
    UniGeneiOs.17880.

    Genome annotation databases

    EnsemblPlantsiOS08T0509200-01; OS08T0509200-01; OS08G0509200. [Q84YK7-1]
    GeneIDi4345995.
    KEGGiosa:4345995.

    Keywords - Coding sequence diversityi

    Alternative splicing

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP006049 Genomic DNA. Translation: BAC57391.1 .
    AP006049 Genomic DNA. Translation: BAD10730.1 .
    AP005816 Genomic DNA. Translation: BAD10670.1 .
    AP005816 Genomic DNA. Translation: BAD10671.1 .
    AP008214 Genomic DNA. Translation: BAF24115.1 .
    AK067001 mRNA. No translation available.
    AK120430 mRNA. No translation available.
    RefSeqi NP_001062201.1. NM_001068736.1. [Q84YK7-1 ]
    UniGenei Os.17880.

    3D structure databases

    ProteinModelPortali Q84YK7.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH1. Glycoside Hydrolase Family 1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS08T0509200-01 ; OS08T0509200-01 ; OS08G0509200 . [Q84YK7-1 ]
    GeneIDi 4345995.
    KEGGi osa:4345995.

    Organism-specific databases

    Gramenei Q84YK7.

    Phylogenomic databases

    eggNOGi COG2723.
    HOGENOMi HOG000088630.
    KOi K01188.
    OMAi YIVGHHE.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10353. PTHR10353. 1 hit.
    Pfami PF00232. Glyco_hydro_1. 1 hit.
    [Graphical view ]
    PRINTSi PR00131. GLHYDRLASE1.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
      Strain: cv. Nipponbare.
    4. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
      Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
      BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiBGL27_ORYSJ
    AccessioniPrimary (citable) accession number: Q84YK7
    Secondary accession number(s): Q7EXZ5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 15, 2009
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 71 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3