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Protein
Submitted name:

Glycosyl hydrolase family protein

Gene

At4g33820

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciARA:AT4G33820-MONOMER.

Protein family/group databases

CAZyiCBM22. Carbohydrate-Binding Module Family 22.
GH10. Glycoside Hydrolase Family 10.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycosyl hydrolase family proteinImported
Submitted name:
Putative glycosyl hydrolase family 10 proteinImported
Gene namesi
Ordered Locus Names:At4g33820Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 4

Organism-specific databases

TAIRiAT4G33820.

Expressioni

Gene expression databases

GenevestigatoriQ84WT5.

Structurei

3D structure databases

ProteinModelPortaliQ84WT5.
SMRiQ84WT5. Positions 208-502.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000237473.
OMAiSAWIQIN.
PhylomeDBiQ84WT5.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR008979. Galactose-bd-like.
IPR001000. Glyco_hydro_10.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q84WT5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNSIKNGFFL CMIFLLWCHV DSGVSIDPFS HSHSLNTECV MKPPRSSETK
60 70 80 90 100
GLLQFSRSLE DDSDEEWKID GNGFIREMAQ RIQLHQGNIY SFSAWVKLRE
110 120 130 140 150
GNDKKVGVVF RTENGRLVHG GEVRANQECW TLLKGGIVPD FSGPVDIFFE
160 170 180 190 200
SENRGAKISA HNVLLKQFSK EEWKLKQDQL IEKIRKSKVR FEVTYENKTA
210 220 230 240 250
VKGVVISLKQ TKSSFLLGCG MNFRILQSQG YRKWFASRFK ITSFTNEMKW
260 270 280 290 300
YATEKARGQE NYTVADSMLK FAEDNGILVR GHTVLWDNPK MQPSWVKNIK
310 320 330 340 350
DPNDVMNVTL NRINSVMKRY KGKLTGWDVV NENLHWDYFE KMLGANASTS
360 370 380 390 400
FYNLAFKIDP DVRLFVNEYN TIENTKEFTA TPIKVKKMME EILAYPGNKN
410 420 430 440 450
MKGAIGAQGH FGPTQPNLAY IRSALDTLGS LGLPIWLTEV DMPKCPNQAQ
460 470 480 490 500
YVEDILREAY SHPAVKGIII FGGPEVSGFD KLTLADKDFN NTQTGDVIDK
510 520 530 540 550
LLKEWQQKSS EIQTNFTADS DNEEEEVSLL HGHYNVNVSH PWIANLSTSF
560 570
SLEVTKEMDQ DQVIRVVISA
Length:570
Mass (Da):64,941
Last modified:June 1, 2003 - v1
Checksum:i073B628D5A70FF78
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT002790 mRNA. Translation: AAO22618.1.
CP002687 Genomic DNA. Translation: AEE86281.1.
RefSeqiNP_680761.1. NM_148395.2.
UniGeneiAt.45321.

Genome annotation databases

EnsemblPlantsiAT4G33820.1; AT4G33820.1; AT4G33820.
GeneIDi829524.
KEGGiath:AT4G33820.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT002790 mRNA. Translation: AAO22618.1.
CP002687 Genomic DNA. Translation: AEE86281.1.
RefSeqiNP_680761.1. NM_148395.2.
UniGeneiAt.45321.

3D structure databases

ProteinModelPortaliQ84WT5.
SMRiQ84WT5. Positions 208-502.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM22. Carbohydrate-Binding Module Family 22.
GH10. Glycoside Hydrolase Family 10.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G33820.1; AT4G33820.1; AT4G33820.
GeneIDi829524.
KEGGiath:AT4G33820.

Organism-specific databases

TAIRiAT4G33820.

Phylogenomic databases

HOGENOMiHOG000237473.
OMAiSAWIQIN.
PhylomeDBiQ84WT5.

Enzyme and pathway databases

BioCyciARA:AT4G33820-MONOMER.

Gene expression databases

GenevestigatoriQ84WT5.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR008979. Galactose-bd-like.
IPR001000. Glyco_hydro_10.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
    EU, CSHL and WU Arabidopsis Sequencing Project
    Mayer K., Schuller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Dusterhoft A., Stiekema W., Entian K.D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
    , Mache R., Muller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portatelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.A., McCullagh B., Bilham L., Robben J., Van der Schueren J., Grymonprez B., Chuang Y.J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirske W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Kotter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., Van Montagu M., Rogers J., Cronin A., Quail M., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Blocker H., Scharfe M., Grimm M., Lohnert T.H., Dose S., de Haan M., Maarse A., Schafer M., Muller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Mundlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Montfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sehkon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffmann J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M., Martienssen R., McCombie W.R.
    Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. ColumbiaImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
  3. TAIR10
    Swarbreck D., Lamesch P., Wilks C., Huala E.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  4. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. ColumbiaImported.

Entry informationi

Entry nameiQ84WT5_ARATH
AccessioniPrimary (citable) accession number: Q84WT5
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: February 4, 2015
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.