Q84W01 (Q84W01_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
At5g26870 EMBL AAO42827.1

Gene names

Ordered Locus Names:

At5g26870 TAIR At5g26870

Organism

Arabidopsis thaliana (Mouse-ear cress) EMBL AAO42827.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	121 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Subcellular location	Nucleus By similarity RuleBase RU000476.
Sequence similarities	Contains 1 MADS-box domain. RuleBase RU000476 SAAS SAAS002100

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000476 SAAS SAAS002100
Cellular component	Nucleus RuleBase RU000476 SAAS SAAS002100
Ligand	DNA-binding RuleBase RU000476 SAAS SAAS002100
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW protein dimerization activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q84W01 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 8C5032B22C25C0FE	FASTA	121	14,265
	10 20 30 40 50 60 MFKKALELST LCDIEVCVIL YSRDGELIKT WPEDQSKVRD MAERFSKLHE RERRKKRTNL 70 80 90 100 110 120 SLFLRKKILD NSKLSEKVLE MKDSLESGLR VLQDKLLLLQ PEKNQTELGQ IPVINNGQNH W

References

[1]

"Arabidopsis ORF clones." Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Chan M.M., Chang C.H., Dale J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M. , Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Submitted (FEB-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BT004581 mRNA. Translation: AAO42827.1.
IPI	IPI00521662.
3D structure databases
ProteinModelPortal	Q84W01.
SMR	Q84W01. Positions 1-49.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q84W01. 3 interactions.
STRING	Q84W01.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
NMPDR	fig|3702.1.peg.24888.
Phylogenomic databases
GeneTree	EPGT00050000013375.
ProtClustDB	CLSN2916565.
Gene expression databases
Genevestigator	Q84W01.
Family and domain databases
InterPro	IPR002100. TF_MADSbox. [Graphical view]
Pfam	PF00319. SRF-TF. 1 hit. [Graphical view]
SMART	SM00432. MADS. 1 hit. [Graphical view]
SUPFAM	SSF55455. TF_MADSbox. 1 hit.
PROSITE	PS50066. MADS_BOX_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q84W01_ARATH

Accession

Primary (citable) accession number: Q84W01

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	December 14, 2011
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)