Reviewed,
UniProtKB/Swiss-Prot Q84VY5 (DPNP4_ARATH)
Last modified
June 16, 2009.
Version 49.
History...
Clusters with 100%,
90%,
50% identity |
Documents (3) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Probable SAL4 phosphatase Alternative name(s): 3'(2'),5'-bisphosphate nucleotidase 4 EC=3.1.3.7 3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase 4 DPNPase 4 Inositol-1,4-bisphosphate 1-phosphatase 4 EC=3.1.3.57 Inositol polyphosphate 1-phosphatase 4 Short name=IPPase 4 | ||||||
| Gene names |
| ||||||
| Organism | Arabidopsis thaliana (Mouse-ear cress) [Complete proteome] | ||||||
| Taxonomic identifier | 3702 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis |
Protein attributes
| Sequence length | 345 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Function | Converts adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) and 3'(2')-phosphoadenosine 5'- phosphate (PAP) to AMP By similarity. Is also able to hydrolyze inositol 1,4-bisphosphate By similarity. |
| Catalytic activity | Adenosine 3',5'-bisphosphate + H2O = adenosine 5'-phosphate + phosphate. 1D-myo-inositol 1,4-bisphosphate + H2O = 1D-myo-inositol 4-phosphate + phosphate. |
| Cofactor | Magnesium By similarity. |
| Pathway | Signal transduction; phosphatidylinositol signaling pathway. |
| Sequence similarities | Belongs to the inositol monophosphatase family. |
| Sequence caution | The sequence CAC05455.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
| Keywords | |
|---|---|
| Ligand | Magnesium Metal-binding |
| Molecular function | Hydrolase |
| Technical term | Complete proteome Multifunctional enzyme |
| Gene Ontology (GO) | |
| Biological process | sulfur metabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | 3'(2'),5'-bisphosphate nucleotidase activity Inferred from electronic annotation. Source: EC inositol-1,4-bisphosphate 1-phosphatase activityInferred from electronic annotation. Source: EC magnesium ion bindingInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 345 | 345 | Probable SAL4 phosphatase | PRO_0000142533 | |||||
Sites | |||||||||
| Metal binding | 71 | 1 | Magnesium 1 By similarity | ||||||
| Metal binding | 134 | 1 | Magnesium 1 By similarity | ||||||
| Metal binding | 134 | 1 | Magnesium 2 By similarity | ||||||
| Metal binding | 136 | 1 | Magnesium 1; via carbonyl oxygen By similarity | ||||||
| Metal binding | 137 | 1 | Magnesium 2 By similarity | ||||||
Sequences
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References
| [1] | "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana." Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. Fransz P.F.Nature 408:823-826(2000) [PubMed: 11130714] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia. |
| [2] | "Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. Ecker J.R.Science 302:842-846(2003) [PubMed: 14593172] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia. |
Cross-references
Sequence databases | |
|---|---|
| AL391712 Genomic DNA. Translation: CAC05455.1. Sequence problems. BT004622 mRNA. Translation: AAO42868.1. | |
| IPI | IPI00537138. |
| RefSeq | NP_196491.2. |
| UniGene | At.32535 |
3D structure databases | |
| HSSP | HSSP built from PDB template 1KA1 based on UniProtKB P32179. |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 830788. |
| GenomeReviews | Gene locus AT5G09290 in contig BA000015_GR. |
| KEGG | ath:AT5G09290. |
| NMPDR | fig|3702.1.peg.23048. |
Organism-specific databases | |
| TAIR | At5g09290. |
Enzyme and pathway databases | |
| BRENDA | 3.1.3.57. 302. 3.1.3.7. 302. |
Gene expression databases | |
| ArrayExpress | Q84VY5. |
| GermOnline | AT5G09290. Arabidopsis thaliana. |
Family and domain databases | |
| InterPro | IPR006239. Bisphos_HAL2. IPR000760. Inositol_P. [Graphical view] |
| PANTHER | PTHR20854. Inositol_P. 1 hit. |
| Pfam | PF00459. Inositol_P. 1 hit. [Graphical view] |
| PRINTS | PR00378. INOSPHPHTASE. |
| TIGRFAMs | TIGR01330. bisphos_HAL2. 1 hit. |
| PROSITE | PS00629. IMP_1. 1 hit. PS00630. IMP_2. False negative. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | DPNP4_ARATH | ||||||||
| Accession | Primary (citable) accession number: Q84VY5 Secondary accession number(s): Q9FY86 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | PPAP (Plant Proteome Annotation Project) | ||||||||
Relevant documents
| Arabidopsis thaliana Arabidopsis thaliana: entries and gene names |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

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