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Q84U90 (Q84U90_VOLCA) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribulose bisphosphate carboxylase small chain RuleBase RU003627

EC=4.1.1.39 RuleBase RU003627
Gene names
Name:rbcS EMBL AAO46873.1
ORF Names:VOLCADRAFT_96572 EMBL EFJ43317.1
OrganismVolvox carteri (Green alga) [Complete proteome] EMBL AAO46873.1
Taxonomic identifier3067 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesVolvocaceaeVolvox

Protein attributes

Sequence length185 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site By similarity. RuleBase RU003627 SAAS SAAS024681

Catalytic activity

2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O. SAAS SAAS024681 RuleBase RU003627

3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2. SAAS SAAS024681 RuleBase RU003627

Subunit structure

8 large chains + 8 small chains By similarity. RuleBase RU003627 SAAS SAAS024681

Sequence similarities

Belongs to the RuBisCO small chain family. RuleBase RU003627

Sequences

Sequence LengthMass (Da)Tools
Q84U90 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 9F74BF86A2678162

FASTA18520,608
        10         20         30         40         50         60 
MAAIVAKSSV AAVVARPARS SVRPVAGLKP AVKAAPVAAP AQANKMMVWT PVNNKMFETF 

        70         80         90        100        110        120 
SYLPPLTDEQ IAAQVDYIVA NGWIPCLEFA EADKAYVSNE STVRFGPVSC LYYDNRYWTM 

       130        140        150        160        170        180 
WKLPMFGCRD PMQVLREIVA CTKAFPDAYV RLVAFDNVKQ VQIMGFLVQR PKSARDWQPA 


NKRSV 

« Hide

References

« Hide 'large scale' references
[1]"rbcS genes of Volvox carteri."
Jakobiak T., Mages W., Stark K., Schmitt R.D.
Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri."
Prochnik S.E., Umen J., Nedelcu A.M., Hallmann A., Miller S.M., Nishii I., Ferris P., Kuo A., Mitros T., Fritz-Laylin L.K., Hellsten U., Chapman J., Simakov O., Rensing S.A., Terry A., Pangilinan J., Kapitonov V., Jurka J. expand/collapse author list , Salamov A., Shapiro H., Schmutz J., Grimwood J., Lindquist E., Lucas S., Grigoriev I.V., Schmitt R., Kirk D., Rokhsar D.S.
Science 329:223-226(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Eve EMBL EFJ43317.1 and f. Nagariensis / Eve.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY205158 Genomic DNA. Translation: AAO46873.1.
GL378374 Genomic DNA. Translation: EFJ43317.1.
RefSeqXP_002955677.1. XM_002955631.1.
UniGeneVca.19.

3D structure databases

ProteinModelPortalQ84U90.
SMRQ84U90. Positions 46-185.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID9626476.
KEGGvcn:VOLCADRAFT_96572.

Phylogenomic databases

KOK01602.

Family and domain databases

Gene3D3.30.190.10. 1 hit.
InterProIPR024681. RuBisCO_sc.
IPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamPF00101. RuBisCO_small. 1 hit.
[Graphical view]
PRINTSPR00152. RUBISCOSMALL.
SMARTSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMSSF55239. SSF55239. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ84U90_VOLCA
AccessionPrimary (citable) accession number: Q84U90
Secondary accession number(s): D8UAG5
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: October 16, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)