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Protein

Heat stress transcription factor A-1

Gene

HSFA1

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE).By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Stress response, Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

ReactomeiR-OSA-3371453. Regulation of HSF1-mediated heat shock response.
R-OSA-3371511. HSF1 activation.
R-OSA-3371568. Attenuation phase.
R-OSA-3371571. HSF1-dependent transactivation.

Names & Taxonomyi

Protein namesi
Recommended name:
Heat stress transcription factor A-1
Alternative name(s):
Heat stress transcription factor 13
Short name:
OsHsf-13
Heat stress transcription factor 3
Short name:
rHsf3
Gene namesi
Name:HSFA1
Synonyms:HSF13, HSF3
Ordered Locus Names:Os03g0854500, LOC_Os03g63750
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 3

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003508201 – 506Heat stress transcription factor A-1Add BLAST506

Post-translational modificationi

Exhibits temperature-dependent phosphorylation.By similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ84T61.

Expressioni

Inductioni

Not induced by heat stress.1 Publication

Gene expression databases

ExpressionAtlasiQ84T61. baseline and differential.
GenevisibleiQ84T61. OS.

Interactioni

Subunit structurei

Homotrimer.By similarity

Protein-protein interaction databases

STRINGi39947.LOC_Os03g63750.1.

Structurei

3D structure databases

ProteinModelPortaliQ84T61.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni164 – 214Hydrophobic repeat HR-A/BAdd BLAST51

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili157 – 207Sequence analysisAdd BLAST51

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi239 – 242Nuclear localization signalSequence analysis4
Motifi449 – 456AHA8

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi3 – 14Poly-AlaAdd BLAST12

Domaini

The hydrophobic-rich region (HR-A/B) corresponds to the oligomerization domain. AHA motifs are transcriptional activator elements.1 Publication

Sequence similaritiesi

Belongs to the HSF family. Class A subfamily.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiKOG0627. Eukaryota.
COG5169. LUCA.
HOGENOMiHOG000237979.
InParanoidiQ84T61.
KOiK09419.
OMAiLENYMPT.
OrthoDBiEOG09360BUI.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR000232. HSF_DNA-bd.
IPR027725. HSF_fam.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PANTHERiPTHR10015. PTHR10015. 1 hit.
PfamiPF00447. HSF_DNA-bind. 1 hit.
[Graphical view]
PRINTSiPR00056. HSFDOMAIN.
SMARTiSM00415. HSF. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS00434. HSF_DOMAIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q84T61-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEAAVAAAAA AAGAVTTAVA PPPGAAVSNG VATAPPPFLM KTYEMVDDPA
60 70 80 90 100
TDAVVSWGPG NNSFVVWNTP EFARDLLPKY FKHSNFSSFV RQLNTYGFRK
110 120 130 140 150
VDPDRWEFAN EGFLRGQKHL LKTINRRKPT HGNNQVQQPQ LPAAPVPACV
160 170 180 190 200
EVGKFGMEEE IEMLKRDKNV LMQELVRLRQ QQQTTDHQLQ TLGKRLQGME
210 220 230 240 250
QRQQQMMSFL AKAMHSPGFL AQFVQQNENS RRRIVASNKK RRLPKQDGSL
260 270 280 290 300
DSESASLDGQ IVKYQPMINE AAKAMLRKIL KLDSSHRFES MGNSDNFLLE
310 320 330 340 350
NYMPNGQGLD SSSSTRNSGV TLAEVPANSG LPYVATSSGL SAICSTSTPQ
360 370 380 390 400
IQCPVVLDNG IPKEVPNMSA VPSVPKAVAP GPTDINILEF PDLQDIVAEE
410 420 430 440 450
NVDIPGGGFE MPGPEGVFSL PEEGDDSVPI ETDEILYNDD TQKLPAIIDS
460 470 480 490 500
FWEQFLVASP LSVDNDEVDS GVLDQKETQQ GNGWTKAENM ANLTEQMGLL

SSHHTG
Length:506
Mass (Da):55,277
Last modified:June 1, 2003 - v1
Checksum:i32BC4F38C8B1A3E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY344485 mRNA. Translation: AAQ23057.1.
AC120506 Genomic DNA. Translation: AAO66547.1.
DP000009 Genomic DNA. Translation: ABF99963.1.
AP008209 Genomic DNA. Translation: BAF13852.1.
AP014959 Genomic DNA. Translation: BAS87428.1.
RefSeqiXP_015630421.1. XM_015774935.1.
UniGeneiOs.9717.

Genome annotation databases

EnsemblPlantsiOS03T0854500-01; OS03T0854500-01; OS03G0854500.
OS03T0854500-02; OS03T0854500-02; OS03G0854500.
GeneIDi4334826.
GrameneiOS03T0854500-01; OS03T0854500-01; OS03G0854500.
OS03T0854500-02; OS03T0854500-02; OS03G0854500.
KEGGiosa:4334826.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY344485 mRNA. Translation: AAQ23057.1.
AC120506 Genomic DNA. Translation: AAO66547.1.
DP000009 Genomic DNA. Translation: ABF99963.1.
AP008209 Genomic DNA. Translation: BAF13852.1.
AP014959 Genomic DNA. Translation: BAS87428.1.
RefSeqiXP_015630421.1. XM_015774935.1.
UniGeneiOs.9717.

3D structure databases

ProteinModelPortaliQ84T61.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os03g63750.1.

Proteomic databases

PaxDbiQ84T61.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS03T0854500-01; OS03T0854500-01; OS03G0854500.
OS03T0854500-02; OS03T0854500-02; OS03G0854500.
GeneIDi4334826.
GrameneiOS03T0854500-01; OS03T0854500-01; OS03G0854500.
OS03T0854500-02; OS03T0854500-02; OS03G0854500.
KEGGiosa:4334826.

Phylogenomic databases

eggNOGiKOG0627. Eukaryota.
COG5169. LUCA.
HOGENOMiHOG000237979.
InParanoidiQ84T61.
KOiK09419.
OMAiLENYMPT.
OrthoDBiEOG09360BUI.

Enzyme and pathway databases

ReactomeiR-OSA-3371453. Regulation of HSF1-mediated heat shock response.
R-OSA-3371511. HSF1 activation.
R-OSA-3371568. Attenuation phase.
R-OSA-3371571. HSF1-dependent transactivation.

Gene expression databases

ExpressionAtlasiQ84T61. baseline and differential.
GenevisibleiQ84T61. OS.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR000232. HSF_DNA-bd.
IPR027725. HSF_fam.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PANTHERiPTHR10015. PTHR10015. 1 hit.
PfamiPF00447. HSF_DNA-bind. 1 hit.
[Graphical view]
PRINTSiPR00056. HSFDOMAIN.
SMARTiSM00415. HSF. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS00434. HSF_DOMAIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiHSFA1_ORYSJ
AccessioniPrimary (citable) accession number: Q84T61
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 23, 2008
Last sequence update: June 1, 2003
Last modified: October 5, 2016
This is version 112 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.