Unreviewed,
UniProtKB/TrEMBL Q84T20 (Q84T20_HORVD)
Last modified
June 16, 2009.
Version 32.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Recommended name: Beta-amylase RuleBase RU000509V3 EC=3.2.1.2 | ||||
| Gene names |
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| Organism | Hordeum vulgare var. distichum (Two-rowed barley) EMBL AAO67355.1 | ||||
| Taxonomic identifier | 112509 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Pooideae › Triticeae › Hordeum |
Protein attributes
| Sequence length | 535 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Catalytic activity | Hydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive maltose units from the non-reducing ends of the chains. RuleBase RU000509V3 |
| Sequence similarities | Belongs to the glycosyl hydrolase 14 family. RuleBase RU004157V1 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Carbohydrate metabolism Polysaccharide degradation RuleBase RU000509V3 |
| Molecular function | Glycosidase RuleBase RU000509V3 Hydrolase |
| Gene Ontology (GO) | |
| Biological process | polysaccharide catabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | beta-amylase activity Inferred from electronic annotation. Source: InterPro cation bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Effects of single nucleotide polymorphisms in beta-amylase1 alleles from barley on functional properties of the enzymes." Clark S.E., Hayes P.M., Henson C.A. Plant Physiol. Biochem. 41:798-804(2003) Cited for: NUCLEOTIDE SEQUENCE. |
| [2] | "DNA variation in the exons and introns of Bmy1 does not account for phenotypic variation in diastatic power, beta amylase 1 enzyme thermostability, or enzyme activity in experimental barley germplasm." Filichkin T.P., Helgesson J., Hayes P.M., Tanaka Y., Duke S.H., Henson C.A. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [3] | "SPATIO-TEMPORAL PROFILING OF STARCH BIOSYNTHESIS AND DEGRADATION IN THE DEVELOPING BARLEY GRAIN." Radchuk V.V., Borisjuk L., Sreenivasulu N., Merx K., Mock H.P., Rolletschek H., Wobus U., Weschke W. Plant Physiol. 150:190-204(2009) Cited for: NUCLEOTIDE SEQUENCE. |
Cross-references
Sequence databases | |
|---|---|
| AF414081 mRNA. Translation: AAO67355.1. EU589328 Genomic DNA. Translation: ACF05415.1. FN179393 mRNA. Translation: CAX51376.1. | |
3D structure databases | |
| HSSP | HSSP built from PDB template 1B1Y based on UniProtKB P16098. |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | GH14. Glycoside Hydrolase Family 14. |
Organism-specific databases | |
| Gramene | Q84T20. |
Family and domain databases | |
| InterPro | IPR001554. Glyco_hydro_14. IPR018238. Glyco_hydro_14_CS. IPR001371. Glyco_hydro_14B_pln. IPR013781. Glyco_hydro_sg_catalytic. [Graphical view] |
| Gene3D | G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. |
| Pfam | PF01373. Glyco_hydro_14. 1 hit. [Graphical view] |
| PRINTS | PR00750. BETAAMYLASE. PR00842. GLHYDLASE14B. |
| PROSITE | PS00506. BETA_AMYLASE_1. 1 hit. PS00679. BETA_AMYLASE_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q84T20_HORVD | ||||||||
| Accession | Primary (citable) accession number: Q84T20 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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