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Protein
Submitted name:

Os03g0454100 protein

Gene

Os03g0454100

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-OSA-977347. Serine biosynthesis.

Names & Taxonomyi

Protein namesi
Submitted name:
Os03g0454100 proteinImported
Submitted name:
Putative membrane proteinImported
Submitted name:
TMS membrane family protein, putative, expressedImported
Submitted name:
Uncharacterized proteinImported
Submitted name:
cDNA clone:J013093K20, full insert sequenceImported
Gene namesi
Name:Os03g0454100Imported
Ordered Locus Names:LOC_Os03g34300Imported, Os03g0454100Imported
ORF Names:OsJ_11423Imported, OSJNBb0047D08.30Imported, OSNPB_030454100Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 3

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei33 – 53HelicalSequence analysisAdd BLAST21
Transmembranei79 – 99HelicalSequence analysisAdd BLAST21
Transmembranei120 – 141HelicalSequence analysisAdd BLAST22
Transmembranei179 – 202HelicalSequence analysisAdd BLAST24
Transmembranei214 – 234HelicalSequence analysisAdd BLAST21
Transmembranei280 – 300HelicalSequence analysisAdd BLAST21
Transmembranei346 – 367HelicalSequence analysisAdd BLAST22
Transmembranei387 – 411HelicalSequence analysisAdd BLAST25

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2592. Eukaryota.
ENOG410XP7K. LUCA.
OMAiENESRTC.
OrthoDBiEOG09360CVY.

Family and domain databases

InterProiIPR005016. TDE1/TMS.
[Graphical view]
PANTHERiPTHR10383. PTHR10383. 1 hit.
PfamiPF03348. Serinc. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q84SS3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWCASCLASA CAGCTCNLCA SALSAISRRS ARLAYCGLFA ASLILSFLMR
60 70 80 90 100
QFATPLLKQI PWINTFDYTQ PDEWFQMNAV LRVSLGNFLF FAIFALMMIG
110 120 130 140 150
VKDQNDRRDA WHHGGWIAKI VVWVVLIVLM FCVPNVVITI YEVLSKFGSG
160 170 180 190 200
LFLLVQVVML LDFTNNWNDS WIEKDEQKWE IALLVVTVVC YLSTFAFSGL
210 220 230 240 250
LFTWFNPSGH DCGLNVFFIT MTIILAFAFA IIALHPQVNG SVMPASVISV
260 270 280 290 300
YCAYLCYTSL SSEPDDYACN GLHRHSKQVS MSALILGMLT TVLSVVYSAV
310 320 330 340 350
RAGSSTTFLS PPSSPRSGIK NPLLGDDNVE AGKSNSKEID ARPVSYSYTF
360 370 380 390 400
FHVIFALASM YSAMLLTGWT SAASDSSELM DVGWTTVWVR ICTEWATAAL
410
YIWTLVAPLL FPDRDFS
Length:417
Mass (Da):46,242
Last modified:June 1, 2003 - v1
Checksum:i56B29638C69787C0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC137925 Genomic DNA. Translation: AAO73245.1.
DP000009 Genomic DNA. Translation: ABF97019.1.
AP008209 Genomic DNA. Translation: BAF12390.1.
AK067011 mRNA. Translation: BAG90227.1.
AP014959 Genomic DNA. Translation: BAS84908.1.
CM000140 Genomic DNA. Translation: EEE59340.1.
RefSeqiXP_015631113.1. XM_015775627.1.
UniGeneiOs.27680.

Genome annotation databases

EnsemblPlantsiOS03T0454100-01; OS03T0454100-01; OS03G0454100.
GeneIDi4333235.
GrameneiOS03T0454100-01; OS03T0454100-01; OS03G0454100.
KEGGiosa:4333235.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC137925 Genomic DNA. Translation: AAO73245.1.
DP000009 Genomic DNA. Translation: ABF97019.1.
AP008209 Genomic DNA. Translation: BAF12390.1.
AK067011 mRNA. Translation: BAG90227.1.
AP014959 Genomic DNA. Translation: BAS84908.1.
CM000140 Genomic DNA. Translation: EEE59340.1.
RefSeqiXP_015631113.1. XM_015775627.1.
UniGeneiOs.27680.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS03T0454100-01; OS03T0454100-01; OS03G0454100.
GeneIDi4333235.
GrameneiOS03T0454100-01; OS03T0454100-01; OS03G0454100.
KEGGiosa:4333235.

Phylogenomic databases

eggNOGiKOG2592. Eukaryota.
ENOG410XP7K. LUCA.
OMAiENESRTC.
OrthoDBiEOG09360CVY.

Enzyme and pathway databases

ReactomeiR-OSA-977347. Serine biosynthesis.

Family and domain databases

InterProiIPR005016. TDE1/TMS.
[Graphical view]
PANTHERiPTHR10383. PTHR10383. 1 hit.
PfamiPF03348. Serinc. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ84SS3_ORYSJ
AccessioniPrimary (citable) accession number: Q84SS3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: November 30, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.