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Q84R49 (GUN10_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 74. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Endoglucanase 10

EC=3.2.1.4
Alternative name(s):
Endo-1,4-beta glucanase 10
OsGLU2
Gene names
Name:GLU2
Ordered Locus Names:Os03g0736300, LOC_Os03g52630
ORF Names:OsJ_12485, OSJNBb0016H12.13
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length620 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

Subcellular location

Membrane; Single-pass type II membrane protein Potential.

Tissue specificity

Ubiquitous. Ref.7

Sequence similarities

Belongs to the glycosyl hydrolase 9 (cellulase E) family.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 620620Endoglucanase 10
PRO_0000249287

Regions

Transmembrane72 – 9221Helical; Signal-anchor for type II membrane protein; Potential

Sites

Active site5131 By similarity
Active site5611 By similarity
Active site5701 By similarity

Amino acid modifications

Glycosylation2161N-linked (GlcNAc...) Potential
Glycosylation3141N-linked (GlcNAc...) Potential
Glycosylation3231N-linked (GlcNAc...) Potential
Glycosylation3441N-linked (GlcNAc...) Potential
Glycosylation4081N-linked (GlcNAc...) Potential
Glycosylation4251N-linked (GlcNAc...) Potential
Glycosylation5671N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
Q84R49 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 2B5721EBD2ED7D52

FASTA62069,067
        10         20         30         40         50         60 
MFGRDPWGGP LEISNADSAT DDDRSRDLDR GALMRQLDET QQSWLLAGPG DQAGKKKKKY 

        70         80         90        100        110        120 
VDLGCMVLDR KIFMWTVGTI LGVGLFIGFV MMIVKLVPHK RPPPPPPDQY TQALHKALMF 

       130        140        150        160        170        180 
FNAQRSGPLP KHNGVSWRGN SCMKDGLSDS TVRKSLVGGF YDAGDAIKFN YPMAWSMTML 

       190        200        210        220        230        240 
SWSVIEYKAK YEAIGELDHV KELIKWGTDY LLKTFNSSAD TIDRIVAQVG VGDTSKGGAQ 

       250        260        270        280        290        300 
PNDHYCWMRP EDIDYPRPVT ECHSCSDLAS EMAAALAAAS IVFKDSKTYS DKLVRGAKAL 

       310        320        330        340        350        360 
YKFGRLQRGR YSPNGSDQAI FYNSTSYWDE FVWGGAWMYF ATGNNTYLSV ATAPGMAKHA 

       370        380        390        400        410        420 
GAYWLDSPNY GVFTWDDKLP GAQVLLSRLR LFLSPGYPYE EILRTFHNQT DNVMCSYLPM 

       430        440        450        460        470        480 
YNSFNFTKGG MIQLNHGRPQ PLQYVVNAAF LASLYSDYLD AADTPGWYCG PTFYTTEVLR 

       490        500        510        520        530        540 
KFARSQLDYV LGKNPLKMSY VVGFGNKYPK RAHHRGASIP HNGVKYGCKG GFKWRETKKP 

       550        560        570        580        590        600 
NPNILIGALV AGPDRHDGFK DVRTNYNYTE PTLAANAGLV AALISLTNIH VKSGIDKNTI 

       610        620 
FSAVPPMFPT PPPPPSAWKP 

« Hide

References

« Hide 'large scale' references
[1]"A complex history of rearrangement in an orthologous region of the maize, sorghum, and rice genomes."
Ilic K., SanMiguel P.J., Bennetzen J.L.
Proc. Natl. Acad. Sci. U.S.A. 100:12265-12270(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species."
The rice chromosome 3 sequencing consortium
Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S. expand/collapse author list , Johri S., Reardon M., Webb K., Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T., Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R., Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J., Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S., Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M., Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L., O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R., Jin W., Lee H.R., Jiang J., Jackson S.
Genome Res. 15:1284-1291(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[4]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[5]"The genomes of Oryza sativa: a history of duplications."
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. expand/collapse author list , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[6]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Nipponbare.
[7]"OsGLU1, a putative membrane-bound endo-1,4-beta-D-glucanase from rice, affects plant internode elongation."
Zhou H.-L., He S.-J., Cao Y.-R., Chen T., Du B.-X., Chu C.-C., Zhang J.-S., Chen S.-Y.
Plant Mol. Biol. 60:137-151(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: TISSUE SPECIFICITY.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY387483 Genomic DNA. Translation: AAR07086.1.
AC118133 Genomic DNA. Translation: AAP03405.1.
DP000009 Genomic DNA. Translation: ABF98746.1.
AP008209 Genomic DNA. Translation: BAF13106.1.
CM000140 Genomic DNA. Translation: EEE59884.1.
AK070408 mRNA. Translation: BAG91933.1.
RefSeqNP_001051192.1. NM_001057727.1.
UniGeneOs.59414.

3D structure databases

ProteinModelPortalQ84R49.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING39947.LOC_Os03g52630.1.

Protein family/group databases

CAZyGH9. Glycoside Hydrolase Family 9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsOS03T0736300-01; OS03T0736300-01; OS03G0736300.
GeneID4334029.
KEGGosa:4334029.

Organism-specific databases

GrameneQ84R49.

Phylogenomic databases

eggNOGNOG257354.
HOGENOMHOG000021033.
KOK01179.
OMADRKIFMW.

Family and domain databases

Gene3D1.50.10.10. 1 hit.
InterProIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR018221. Glyco_hydro_9_AS.
[Graphical view]
PfamPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMSSF48208. SSF48208. 1 hit.
PROSITEPS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameGUN10_ORYSJ
AccessionPrimary (citable) accession number: Q84R49
Secondary accession number(s): Q0DNT2
Entry history
Integrated into UniProtKB/Swiss-Prot: September 19, 2006
Last sequence update: June 1, 2003
Last modified: July 9, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries