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Q84R16 (Q84R16_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Exostosin family protein EMBL AEE83357.1
Submitted name:
Putative uncharacterized protein At4g13990 EMBL AAP04155.1
Gene names
Ordered Locus Names:At4g13990 TAIR At4g13990
ORF Names:AT4G13990 EMBL AEE83357.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL AAP04155.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length521 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular componentcell wall

Inferred from direct assay. Source: TAIR

membrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q84R16 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 609410A9DEFE337D

FASTA52160,991
        10         20         30         40         50         60 
MRPKNYSQME KPISITTGKF RTNNNNNHNN VWFVVPLFFI LCFVLLCFDY SALFTDTDET 

        70         80         90        100        110        120 
AFSIPDVTQK STSSEFTKDD NFSRFPDDPS PDSSCSGRYI YVHELPYRFN GDLLDNCFKI 

       130        140        150        160        170        180 
TRGTEKDICP YIENYGFGPV IKNYENVLLK QSWFTTNQFM LEVIFHNKMI NYRCLTNDSS 

       190        200        210        220        230        240 
LASAVFVPFY AGLDMSRYLW GFNITVRDSS SHELMDWLVV QKEWGRMSGR DHFLVSGRIA 

       250        260        270        280        290        300 
WDFRRQTDNE SDWGSKLRFL PESRNMSMLS IESSSWKNDY AIPYPTCFHP RSVDEIVEWQ 

       310        320        330        340        350        360 
ELMRSRKREY LFTFAGAPRP EYKDSVRGKI IDECLESKKQ CYLLDCNYGN VNCDNPVNVM 

       370        380        390        400        410        420 
KVFRNSVFCL QPPGDSYTRR SMFDSILAGC IPVFFHPGTA YAQYKWHLPK NHSSYSVYLP 

       430        440        450        460        470        480 
VKDVKEWNIK IKERLIEIPE ERVVRLREEV IRLIPKVVYA DPKYGSDGSE DAFELAVKGM 

       490        500        510        520 
LERIEEVREM MRQGKDGSDG FDDRDDYKYT FSPYEEPQVL A

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
EU, CSHL and WU Arabidopsis Sequencing Project
Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B. expand/collapse author list , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
Nature 402:769-777(1999) [PubMed: 10617198] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[3]"Arabidopsis Open Reading Frame (ORF) Clones."
Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., Onodera C.S., Quach H.L., Tang C.C., Toriumi M., Wong C., Wu H.C., Yu G., Yuan S., Chen H., Cheuk R., Jones T., Kim C.J. expand/collapse author list , Nguyen M., Palm C.J., Shinn P., Southwick A., Tripp M.G., Wu T., Davis R.W., Ecker J.R., Theologis A.
Submitted (APR-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BT006172 mRNA. Translation: AAP04155.1.
CP002687 Genomic DNA. Translation: AEE83357.1.
IPIIPI00533669.
RefSeqNP_193135.2. NM_117474.2.
UniGeneAt.48856.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGT47. Glycosyltransferase Family 47.

Proteomic databases

PRIDEQ84R16.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT4G13990.1; AT4G13990.1; AT4G13990.
GeneID827035.
GenomeReviewsGene locus AT4G13990 in contig CT486007_GR.
KEGGath:AT4G13990.
NMPDRfig|3702.1.peg.19096.

Organism-specific databases

TAIRAt4g13990.

Phylogenomic databases

GeneTreeEPGT00070000028089.
HOGENOMHBG595076.
InParanoidQ84R16.
OMASIESSSW.
PhylomeDBQ84R16.
ProtClustDBCLSN2680967.

Gene expression databases

GenevestigatorQ84R16.

Family and domain databases

InterProIPR004263. Exostosin.
[Graphical view]
PfamPF03016. Exostosin. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ84R16_ARATH
AccessionPrimary (citable) accession number: Q84R16
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: January 25, 2012
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info