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Unreviewed, UniProtKB/TrEMBL Q84M79 (Q84M79_ORYSJ)

Last modified February 10, 2009. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Os03g0857600 protein EMBL BAF13871.1
Submitted name:
    cDNA clone:006-206-D05, full insert sequence EMBL BAG87711.1
    cDNA clone:J023117O12, full insert sequence EMBL BAG94746.1
    Expressed protein EMBL ABF99997.1
    Putative uncharacterized protein OSJNBa0059G06.14 EMBL AAP21390.1
Gene names
Name: OSJNBa0059G06.14 EMBL AAP21390.1
Synonyms: Os03g0857600 EMBL BAF13871.1
ORF Names: LOC_Os03g64050 EMBL ABF99997.1
OrganismOryza sativa subsp. japonica (Rice) EMBL AAP21390.1
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length266 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

Sequences

Sequence LengthMass (Da)Tools
Q84M79-1 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 0D5E1E944259937E

FASTA26628,333
        10         20         30         40         50         60 
MASPQLQLQV LALLLLLATT ATATATPTPT LIFLLGGQSN MGGRGGATNG PWDGVVPPEC 

        70         80         90        100        110        120 
APSPRILRLS PELRWEEARE PLHAGIDVHN VLGVGPGMSF AHALFRAIPP STVIGLVPCA 

       130        140        150        160        170        180 
QGGTPIANWT RGTELYERMV GRGRAAMATA GAGAGARMGA LLWYQGEADT IRREDAEVYA 

       190        200        210        220        230        240 
RKMEGMVRDV RRDLALPELL VIQVGIATGQ GKFVEPVREA QKAVRLPFLK YVDAKGLPIA 

       250        260 
NDYTHLTTPA QVKLGKLLAK AYLSTL 

« Hide

References

[1]"Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence."
Buell C.R., Yuan Q., Ouyang S., Liu J., Gansberger K., Jones K.M., Overton II L.L., Tsitrin T., Kim M.M., Bera J.J., Jin S.S., Fadrosh D.W., Tallon L.J., Koo H., Zismann V., Hsiao J., Blunt S., Vanaken S.S. expand/collapse author list , Riedmuller S.B., Utterback T.T., Feldblyum T.V., Yang Q.Q., Haas B.J., Suh B.B., Peterson J.J., Quackenbush J., White O., Salzberg S.L., Fraser C.M.
Submitted (SEP-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]Buell R.
Submitted (APR-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice."
Kikuchi S., Satoh K., Nagata T., Kawagashira N., Doi K., Kishimoto N., Yazaki J., Ishikawa M., Yamada H., Ooka H., Hotta I., Kojima K., Namiki T., Ohneda E., Yahagi W., Suzuki K., Li C., Ohtsuki K. expand/collapse author list , Shishiki T., Otomo Y., Murakami K., Iida Y., Sugano S., Fujimura T., Suzuki Y., Tsunoda Y., Kurosaki T., Kodama T., Masuda H., Kobayashi M., Xie Q., Lu M., Narikawa R., Sugiyama A., Mizuno K., Yokomizo S., Niikura J., Ikeda R., Ishibiki J., Kawamata M., Yoshimura A., Miura J., Kusumegi T., Oka M., Ryu R., Ueda M., Matsubara K., Kawai J., Carninci P., Adachi J., Aizawa K., Arakawa T., Fukuda S., Hara A., Hashidume W., Hayatsu N., Imotani K., Ishii Y., Itoh M., Kagawa I., Kondo S., Konno H., Miyazaki A., Osato N., Ota Y., Saito R., Sasaki D., Sato K., Shibata K., Shinagawa A., Shiraki T., Yoshino M., Hayashizaki Y.
Science 301:376-379(2003)
Cited for: NUCLEOTIDE SEQUENCE.
[4]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed: 16100779] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[5]"The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information."
Ohyanagi H., Tanaka T., Sakai H., Shigemoto Y., Yamaguchi K., Habara T., Fujii Y., Antonio B.A., Nagamura Y., Imanishi T., Ikeo K., Itoh T., Gojobori T., Sasaki T.
Nucleic Acids Res. 34:D741-D744(2006) [PubMed: 16381971] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[6]"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana."
The rice annotation project (RAP)
Genome Res. 17:175-183(2007) [PubMed: 17210932] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[7]"Oryza sativa nipponbare(GA3) genomic DNA, chromosome 3."
IRGSP(International Rice Genome Sequencing Project)
Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[8]"The First Rice Annotation Project Meeting (RAP1)."
The Rice Annotation Project (RAP)
Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[9]"Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species."
The rice chromosome 3 sequencing consortium
Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S. expand/collapse author list , Johri S., Reardon M., Webb K., Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T., Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R., Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H.-I., Rambo T., Currie J., Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S., Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M., Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L., O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R., Jin W., Lee H.R., Jiang J., Jackson S.
Genome Res. 15:1284-1291(2005) [PubMed: 16109971] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[10]Buell C.R., Wing R.A., McCombie W.A., Ouyang S.
Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[11]Buell R., Wing R.A., McCombie W.A., Ouyang S.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

AC096690 Genomic DNA. Translation: AAP21390.1.
DP000009 Genomic DNA. Translation: ABF99997.1.
AP008209 Genomic DNA. Translation: BAF13871.1.
AK061073 mRNA. Translation: BAG87711.1.
AK100733 mRNA. Translation: BAG94746.1.
RefSeqNP_001051957.1.
UniGeneOs.15725

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID4334847.
KEGGosa:4334847.

Organism-specific databases

GrameneQ84M79.

Family and domain databases

InterProIPR005181. DUF303_acetylest.
[Graphical view]
PfamPF03629. DUF303. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ84M79_ORYSJ
AccessionPrimary (citable) accession number: Q84M79
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: February 10, 2009
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Sequences · References · Cross-references · Entry information