Q84M79 (Q84M79_ORYSJ) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 43.
History...
Names and origin
| Protein names | Submitted name: Expressed protein EMBL ABF99997.1 Submitted name: Os03g0857600 protein EMBL BAF13871.1 Submitted name: Putative uncharacterized protein OSJNBa0059G06.14 EMBL AAP21390.1 Submitted name: cDNA clone:006-206-D05, full insert sequence EMBL BAG87711.1 Submitted name: cDNA clone:J023117O12, full insert sequence EMBL BAG94746.1 | ||||||
| Gene names |
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| Organism | Oryza sativa subsp. japonica (Rice) EMBL AAP21390.1 | ||||||
| Taxonomic identifier | 39947 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza |
Protein attributes
| Sequence length | 266 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
Sequences
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References
| [1] | "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice." Kikuchi S., Satoh K., Nagata T., Kawagashira N., Doi K., Kishimoto N., Yazaki J., Ishikawa M., Yamada H., Ooka H., Hotta I., Kojima K., Namiki T., Ohneda E., Yahagi W., Suzuki K., Li C., Ohtsuki K. Hayashizaki Y.Science 301:376-379(2003) Cited for: NUCLEOTIDE SEQUENCE. |
| [2] | "Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species." The rice chromosome 3 sequencing consortium Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S. Jackson S.Genome Res. 15:1284-1291(2005) [PubMed: 16109971] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
| [3] | "The map-based sequence of the rice genome." International Rice Genome Sequencing Project Matsumoto T., Wu J., Kanamori H., Katayose Y., Fujisawa M., Namiki N., Mizuno H., Yamamoto K., Antonio B.A., Baba T., Sakata K., Nagamura Y., Aoki H., Arikawa K., Arita K., Bito T., Chiden Y., Fujitsuka N. Sasaki T.Nature 436:793-800(2005) Cited for: NUCLEOTIDE SEQUENCE. |
| [4] | "Curated Genome Annotation of Oryza sativa ssp. japonica and Comparative Genome Analysis with Arabidopsis thaliana." The Rice Annotation Project (RAP) Itoh T., Tanaka T., Barrero R.A., Yamasaki C., Fujii Y., Hilton P.B., Antonio B.A., Aono H., Apweiler R., Bruskiewich R., Bureau T., Burr F., Costa de Oliveira A., Fuks G., Habara T., Haberer G., Han B., Harada E. Sasaki T.Genome Res. 17:175-183(2007) Cited for: NUCLEOTIDE SEQUENCE. |
| [5] | "The Rice Annotation Project Database (RAP-DB): 2008 update." The Rice Annotation Project (RAP) Tanaka T., Antonio B.A., Kikuchi S., Matsumoto T., Nagamura Y., Numa H., Sakai H., Wu J., Itoh T., Sasaki T., Aono R., Fujii Y., Habara T., Harada E., Kanno M., Kawahara Y., Kawashima H., Kubooka H. Echeverria M.Nucleic Acids Res. 36:D1028-D1033(2008) Cited for: NUCLEOTIDE SEQUENCE. |
| [6] | "The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information." Ohyanagi H., Tanaka T., Sakai H., Shigemoto Y., Yamaguchi K., Habara T., Fujii Y., Antonio B.A., Nagamura Y., Imanishi T., Ikeo K., Itoh T., Gojobori T., Sasaki T. Nucleic Acids Res. 34:D741-D744(2006) [PubMed: 16381971] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
| [7] | "The Second Rice Annotation Project Meeting (RAP2)." The Rice Annotation Project (RAP) Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [8] | "Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence." Buell C.R., Yuan Q., Ouyang S., Liu J., Gansberger K., Jones K.M., Overton II L.L., Tsitrin T., Kim M.M., Bera J.J., Jin S.S., Fadrosh D.W., Tallon L.J., Koo H., Zismann V., Hsiao J., Blunt S., Vanaken S.S. Fraser C.M.Submitted (SEP-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [9] | Buell R. Submitted (APR-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [10] | Buell R., Wing R.A., McCombie W.A., Ouyang S. Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [11] | "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 3." IRGSP(International Rice Genome Sequencing Project) Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AC096690 Genomic DNA. Translation: AAP21390.1. DP000009 Genomic DNA. Translation: ABF99997.1. AP008209 Genomic DNA. Translation: BAF13871.1. AK061073 mRNA. Translation: BAG87711.1. AK100733 mRNA. Translation: BAG94746.1. |
| RefSeq | NP_001051957.1. NM_001058492.1. |
| UniGene | Os.15725. |
3D structure databases | |
| ProteinModelPortal | Q84M79. |
| ModBase | Search... |
Proteomic databases | |
| PRIDE | Q84M79. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblPlants | LOC_Os03g64050.1; LOC_Os03g64050.1; LOC_Os03g64050. |
| GeneID | 4334847. |
| KEGG | osa:4334847. |
Organism-specific databases | |
| Gramene | Q84M79. |
Phylogenomic databases | |
| GeneTree | EPGT00050000018267. |
| HOGENOM | HBG746696. |
| OMA | KYVDAKG. |
| PhylomeDB | Q84M79. |
| ProtClustDB | CLSN2689756. |
Family and domain databases | |
| InterPro | IPR005181. DUF303_acetylest. IPR013830. Esterase_SGNH_hydro-type. [Graphical view] |
| Pfam | PF03629. DUF303. 1 hit. [Graphical view] |
| SUPFAM | SSF52266. Esterase_SGNH_hydro-type. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | Q84M79_ORYSJ | ||||||||
| Accession | Primary (citable) accession number: Q84M79 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
