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Protein
Submitted name:

C2H2-type zinc finger family protein

Gene

At5g04390

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
C2H2-type zinc finger family proteinImported
Submitted name:
Putative zinc finger transcription factorImported
Gene namesi
Ordered Locus Names:At5g04390Imported
ORF Names:T19N18.120Imported, T19N18_120Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G04390.
TAIRilocus:2179924. AT5G04390.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

IntActiQ84K31. 5 interactors.
STRINGi3702.AT5G04390.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini153 – 180C2H2-typeInterPro annotationAdd BLAST28
Domaini229 – 253C2H2-typeInterPro annotationAdd BLAST25

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
HOGENOMiHOG000238452.
OMAiASKQNHE.
OrthoDBiEOG09360M66.

Family and domain databases

InterProiView protein in InterPro
IPR013087. Znf_C2H2_type.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 2 hits.
SUPFAMiSSF57667. SSF57667. 2 hits.
PROSITEiView protein in PROSITE
PS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.

Sequencei

Sequence statusi: Complete.

Q84K31-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEAFEEATKE QSLILKGKRT KRQRPQSPIP FSISPPIVST PENNMEEEYT
60 70 80 90 100
DLDSKDNALG NDEGNHKKDG VITSSSSSAS WSSQNNHTLK AAEDEEDQDI
110 120 130 140 150
ANCLILLAQG HSLPHNNHHL PNSNNNNTYR FTSRRFLETS SSNSGGKAGY
160 170 180 190 200
YVYQCKTCDR TFPSFQALGG HRASHKKPKA ASFYSNLDLK KNTYANDAVS
210 220 230 240 250
LVHTTTTVFK NNNSRSLVVY GKASKNKVHE CGICGAEFTS GQALGGHMRR
260 270 280 290 300
HRGAVVVPAV IAPTVTVATA AANTELSLSS MSFDQISDGH QDHLAMPAKK
310 320 330 340 350
KARTVVSLDL DLNLPAPEDE NRVNGFSFAS KQNHEQEHQQ KKQREEPKSL
360
VLSAPTLVDC HY
Length:362
Mass (Da):39,794
Last modified:June 1, 2003 - v1
Checksum:i2E2285D0A6603EB9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT003885 mRNA. Translation: AAO41934.1.
BT005031 mRNA. Translation: AAO50564.1.
CP002688 Genomic DNA. Translation: AED90737.1.
RefSeqiNP_196059.1. NM_120521.3.
UniGeneiAt.33131.

Genome annotation databases

EnsemblPlantsiAT5G04390.1; AT5G04390.1; AT5G04390.
GeneIDi830318.
GrameneiAT5G04390.1; AT5G04390.1; AT5G04390.
KEGGiath:AT5G04390.

Similar proteinsi

Entry informationi

Entry nameiQ84K31_ARATH
AccessioniPrimary (citable) accession number: Q84K31
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: September 27, 2017
This is version 120 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported