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Protein
Submitted name:

C2H2-type zinc finger protein

Gene

At5g04390

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
C2H2-type zinc finger proteinImported
Submitted name:
Putative zinc finger transcription factorImported
Gene namesi
Ordered Locus Names:At5g04390Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G04390.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi3702.AT5G04390.1.

Structurei

3D structure databases

SMRiQ84K31. Positions 144-179, 221-261.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini153 – 18028C2H2-typeInterPro annotationAdd
BLAST
Domaini229 – 25325C2H2-typeInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
HOGENOMiHOG000238452.
OMAiQDIANCL.
OrthoDBiEOG09360M66.
PhylomeDBiQ84K31.

Family and domain databases

InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
[Graphical view]
PfamiPF13912. zf-C2H2_6. 2 hits.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 2 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q84K31-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEAFEEATKE QSLILKGKRT KRQRPQSPIP FSISPPIVST PENNMEEEYT
60 70 80 90 100
DLDSKDNALG NDEGNHKKDG VITSSSSSAS WSSQNNHTLK AAEDEEDQDI
110 120 130 140 150
ANCLILLAQG HSLPHNNHHL PNSNNNNTYR FTSRRFLETS SSNSGGKAGY
160 170 180 190 200
YVYQCKTCDR TFPSFQALGG HRASHKKPKA ASFYSNLDLK KNTYANDAVS
210 220 230 240 250
LVHTTTTVFK NNNSRSLVVY GKASKNKVHE CGICGAEFTS GQALGGHMRR
260 270 280 290 300
HRGAVVVPAV IAPTVTVATA AANTELSLSS MSFDQISDGH QDHLAMPAKK
310 320 330 340 350
KARTVVSLDL DLNLPAPEDE NRVNGFSFAS KQNHEQEHQQ KKQREEPKSL
360
VLSAPTLVDC HY
Length:362
Mass (Da):39,794
Last modified:June 1, 2003 - v1
Checksum:i2E2285D0A6603EB9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT003885 mRNA. Translation: AAO41934.1.
BT005031 mRNA. Translation: AAO50564.1.
CP002688 Genomic DNA. Translation: AED90737.1.
RefSeqiNP_196059.1. NM_120521.2.
UniGeneiAt.33131.

Genome annotation databases

EnsemblPlantsiAT5G04390.1; AT5G04390.1; AT5G04390.
GeneIDi830318.
GrameneiAT5G04390.1; AT5G04390.1; AT5G04390.
KEGGiath:AT5G04390.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT003885 mRNA. Translation: AAO41934.1.
BT005031 mRNA. Translation: AAO50564.1.
CP002688 Genomic DNA. Translation: AED90737.1.
RefSeqiNP_196059.1. NM_120521.2.
UniGeneiAt.33131.

3D structure databases

SMRiQ84K31. Positions 144-179, 221-261.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT5G04390.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G04390.1; AT5G04390.1; AT5G04390.
GeneIDi830318.
GrameneiAT5G04390.1; AT5G04390.1; AT5G04390.
KEGGiath:AT5G04390.

Organism-specific databases

TAIRiAT5G04390.

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
HOGENOMiHOG000238452.
OMAiQDIANCL.
OrthoDBiEOG09360M66.
PhylomeDBiQ84K31.

Family and domain databases

InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
[Graphical view]
PfamiPF13912. zf-C2H2_6. 2 hits.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 2 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ84K31_ARATH
AccessioniPrimary (citable) accession number: Q84K31
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: September 7, 2016
This is version 111 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.