Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q84JI0 (P2C30_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 83. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable protein phosphatase 2C 30

Short name=OsPP2C30
EC=3.1.3.16
Gene names
Ordered Locus Names:Os03g0268600, LOC_Os03g16170
ORF Names:OJA1364E02.13, OsJ_009875, OSJNBa0071M09.4
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length404 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity.

Sequence similarities

Belongs to the PP2C family.

Contains 1 PP2C-like domain.

Ontologies

Keywords
   LigandMagnesium
Manganese
Metal-binding
   Molecular functionHydrolase
Protein phosphatase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processchloroplast organization

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

leaf senescence

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

negative regulation of abscisic acid-activated signaling pathway

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

negative regulation of anion channel activity

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

negative regulation of seed dormancy process

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

positive regulation of gibberellic acid mediated signaling pathway

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

positive regulation of seed germination

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

protein dephosphorylation

Inferred from electronic annotation. Source: InterPro

regulation of stomatal movement

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

release of seed from dormancy

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

response to abscisic acid

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

response to cold

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

response to water deprivation

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

stomatal movement

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Cellular_componentGolgi apparatus

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

cis-Golgi network membrane

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

cytosol

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

nucleus

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

protein serine/threonine phosphatase activity

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 404404Probable protein phosphatase 2C 30
PRO_0000363276

Regions

Domain76 – 392317PP2C-like
Compositional bias26 – 8863Arg-rich

Sites

Metal binding1111Manganese 1 By similarity
Metal binding1111Manganese 2 By similarity
Metal binding1121Manganese 1; via carbonyl oxygen By similarity
Metal binding2981Manganese 2 By similarity
Metal binding3901Manganese 2 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q84JI0 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: AE54FDF177D0B6BF

FASTA40443,282
        10         20         30         40         50         60 
MAEICCEVVA GSSSEGKGPE CDTGSRAARR RRMEIRRLRV VAERGAEEET SGKRRRLDGG 

        70         80         90        100        110        120 
GGEASTDEED REVERARYGF TSVCGRRRDM EDSVSACPGF LPGHHFFGVF DGHGCSHVAT 

       130        140        150        160        170        180 
SCGQRMHEIV VDEAGAAAGS AGLDEEARWR GVMERSFARM DAEAVASSRG SVAPAPTCRC 

       190        200        210        220        230        240 
EMQLPKCDHV GSTAVVAVLG PRHVVVANCG DSRAVLCRGG AAIPLSCDHK PDRPDELERI 

       250        260        270        280        290        300 
HAAGGRVIFW DGARVFGMLA MSRAIGDSYL KPYVICDPEV RVMERKDGED EFLILASDGL 

       310        320        330        340        350        360 
WDVVSNEVAC NVVRACLRSS GRRERNRSSP TSNLSPRQSS SSGDEAPNDG APSAAAGSES 

       370        380        390        400 
DEESAAEEDK ACAEAAVLLT KLALARQTSD NVSVVVVNLR RRKL 

« Hide

References

« Hide 'large scale' references
[1]"Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species."
The rice chromosome 3 sequencing consortium
Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S. expand/collapse author list , Johri S., Reardon M., Webb K., Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T., Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R., Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J., Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S., Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M., Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L., O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R., Jin W., Lee H.R., Jiang J., Jackson S.
Genome Res. 15:1284-1291(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[4]"The genomes of Oryza sativa: a history of duplications."
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. expand/collapse author list , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[5]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Nipponbare.
[6]"Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC139168 Genomic DNA. Translation: AAP06902.1.
AC135209 Genomic DNA. Translation: AAP06912.1.
DP000009 Genomic DNA. Translation: ABF95181.1.
AP008209 Genomic DNA. Translation: BAF11588.1.
CM000140 Genomic DNA. Translation: EAZ26392.1.
AK069274 mRNA. Translation: BAG91354.1.
RefSeqNP_001049674.1. NM_001056209.1.
UniGeneOs.35013.

3D structure databases

ProteinModelPortalQ84JI0.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ84JI0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsOS03T0268600-01; OS03T0268600-01; OS03G0268600.
GeneID4332374.
KEGGosa:4332374.

Organism-specific databases

GrameneQ84JI0.

Phylogenomic databases

eggNOGCOG0631.
KOK14497.
OMAANCKCEM.
ProtClustDBCLSN2692044.

Family and domain databases

Gene3D3.60.40.10. 2 hits.
InterProIPR001932. PP2C-like_dom.
IPR000222. PP2C_Mn2_Asp60_BS.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERPTHR13832. PTHR13832. 1 hit.
PfamPF00481. PP2C. 1 hit.
[Graphical view]
SMARTSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF81606. SSF81606. 2 hits.
PROSITEPS01032. PP2C. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameP2C30_ORYSJ
AccessionPrimary (citable) accession number: Q84JI0
Entry history
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: June 1, 2003
Last modified: April 16, 2014
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations