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Q84JI0

- P2C30_ORYSJ

UniProt

Q84JI0 - P2C30_ORYSJ

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Protein

Probable protein phosphatase 2C 30

Gene
Os03g0268600, LOC_Os03g16170, OJA1364E02.13, OsJ_009875, OSJNBa0071M09.4
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at transcript leveli

Functioni

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Binds 2 magnesium or manganese ions per subunit By similarity.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi111 – 1111Manganese 1 By similarity
Metal bindingi111 – 1111Manganese 2 By similarity
Metal bindingi112 – 1121Manganese 1; via carbonyl oxygen By similarity
Metal bindingi298 – 2981Manganese 2 By similarity
Metal bindingi390 – 3901Manganese 2 By similarity

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. protein serine/threonine phosphatase activity Source: EnsemblPlants/Gramene

GO - Biological processi

  1. chloroplast organization Source: EnsemblPlants/Gramene
  2. leaf senescence Source: EnsemblPlants/Gramene
  3. negative regulation of abscisic acid-activated signaling pathway Source: EnsemblPlants/Gramene
  4. negative regulation of anion channel activity Source: EnsemblPlants/Gramene
  5. negative regulation of seed dormancy process Source: EnsemblPlants/Gramene
  6. positive regulation of gibberellic acid mediated signaling pathway Source: EnsemblPlants/Gramene
  7. positive regulation of seed germination Source: EnsemblPlants/Gramene
  8. protein dephosphorylation Source: InterPro
  9. regulation of stomatal movement Source: EnsemblPlants/Gramene
  10. release of seed from dormancy Source: EnsemblPlants/Gramene
  11. response to abscisic acid Source: EnsemblPlants/Gramene
  12. response to cold Source: EnsemblPlants/Gramene
  13. response to water deprivation Source: EnsemblPlants/Gramene
  14. stomatal movement Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protein phosphatase

Keywords - Ligandi

Magnesium, Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein phosphatase 2C 30 (EC:3.1.3.16)
Short name:
OsPP2C30
Gene namesi
Ordered Locus Names:Os03g0268600, LOC_Os03g16170
ORF Names:OJA1364E02.13, OsJ_009875, OSJNBa0071M09.4
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 3

Organism-specific databases

GrameneiQ84JI0.

Subcellular locationi

GO - Cellular componenti

  1. cis-Golgi network membrane Source: EnsemblPlants/Gramene
  2. cytosol Source: EnsemblPlants/Gramene
  3. Golgi apparatus Source: EnsemblPlants/Gramene
  4. nucleus Source: EnsemblPlants/Gramene
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 404404Probable protein phosphatase 2C 30PRO_0000363276Add
BLAST

Proteomic databases

PRIDEiQ84JI0.

Structurei

3D structure databases

ProteinModelPortaliQ84JI0.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini76 – 392317PP2C-likeAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi26 – 8863Arg-richAdd
BLAST

Sequence similaritiesi

Belongs to the PP2C family.
Contains 1 PP2C-like domain.

Phylogenomic databases

eggNOGiCOG0631.
KOiK14497.
OMAiANCKCEM.

Family and domain databases

Gene3Di3.60.40.10. 2 hits.
InterProiIPR001932. PP2C-like_dom.
IPR000222. PP2C_Mn2_Asp60_BS.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 2 hits.
PROSITEiPS01032. PP2C. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q84JI0-1 [UniParc]FASTAAdd to Basket

« Hide

MAEICCEVVA GSSSEGKGPE CDTGSRAARR RRMEIRRLRV VAERGAEEET    50
SGKRRRLDGG GGEASTDEED REVERARYGF TSVCGRRRDM EDSVSACPGF 100
LPGHHFFGVF DGHGCSHVAT SCGQRMHEIV VDEAGAAAGS AGLDEEARWR 150
GVMERSFARM DAEAVASSRG SVAPAPTCRC EMQLPKCDHV GSTAVVAVLG 200
PRHVVVANCG DSRAVLCRGG AAIPLSCDHK PDRPDELERI HAAGGRVIFW 250
DGARVFGMLA MSRAIGDSYL KPYVICDPEV RVMERKDGED EFLILASDGL 300
WDVVSNEVAC NVVRACLRSS GRRERNRSSP TSNLSPRQSS SSGDEAPNDG 350
APSAAAGSES DEESAAEEDK ACAEAAVLLT KLALARQTSD NVSVVVVNLR 400
RRKL 404
Length:404
Mass (Da):43,282
Last modified:June 1, 2003 - v1
Checksum:iAE54FDF177D0B6BF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC139168 Genomic DNA. Translation: AAP06902.1.
AC135209 Genomic DNA. Translation: AAP06912.1.
DP000009 Genomic DNA. Translation: ABF95181.1.
AP008209 Genomic DNA. Translation: BAF11588.1.
CM000140 Genomic DNA. Translation: EAZ26392.1.
AK069274 mRNA. Translation: BAG91354.1.
RefSeqiNP_001049674.1. NM_001056209.1.
UniGeneiOs.35013.

Genome annotation databases

EnsemblPlantsiOS03T0268600-01; OS03T0268600-01; OS03G0268600.
GeneIDi4332374.
KEGGiosa:4332374.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC139168 Genomic DNA. Translation: AAP06902.1 .
AC135209 Genomic DNA. Translation: AAP06912.1 .
DP000009 Genomic DNA. Translation: ABF95181.1 .
AP008209 Genomic DNA. Translation: BAF11588.1 .
CM000140 Genomic DNA. Translation: EAZ26392.1 .
AK069274 mRNA. Translation: BAG91354.1 .
RefSeqi NP_001049674.1. NM_001056209.1.
UniGenei Os.35013.

3D structure databases

ProteinModelPortali Q84JI0.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi Q84JI0.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS03T0268600-01 ; OS03T0268600-01 ; OS03G0268600 .
GeneIDi 4332374.
KEGGi osa:4332374.

Organism-specific databases

Gramenei Q84JI0.

Phylogenomic databases

eggNOGi COG0631.
KOi K14497.
OMAi ANCKCEM.

Family and domain databases

Gene3Di 3.60.40.10. 2 hits.
InterProi IPR001932. PP2C-like_dom.
IPR000222. PP2C_Mn2_Asp60_BS.
IPR015655. Protein_Pase_2C.
[Graphical view ]
PANTHERi PTHR13832. PTHR13832. 1 hit.
Pfami PF00481. PP2C. 1 hit.
[Graphical view ]
SMARTi SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view ]
SUPFAMi SSF81606. SSF81606. 2 hits.
PROSITEi PS01032. PP2C. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species."
    The rice chromosome 3 sequencing consortium
    Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S.
    , Johri S., Reardon M., Webb K., Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T., Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R., Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J., Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S., Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M., Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L., O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R., Jin W., Lee H.R., Jiang J., Jackson S.
    Genome Res. 15:1284-1291(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  5. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  6. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
    Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
    BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiP2C30_ORYSJ
AccessioniPrimary (citable) accession number: Q84JI0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: June 1, 2003
Last modified: May 14, 2014
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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