Unreviewed,
UniProtKB/TrEMBL Q84ID1 (Q84ID1_BACFR)
Last modified
June 16, 2009.
Version 40.
History...
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Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Submitted name: Putative beta-galactosidase EMBL BAC56907.2 | ||||
| Gene names |
| ||||
| Organism | Bacteroides fragilis [Complete proteome] [HAMAP] EMBL BAC56907.2 | ||||
| Taxonomic identifier | 817 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides |
Protein attributes
| Sequence length | 928 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Predicted. |
Ontologies
| Keywords | |
|---|---|
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compoundsInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Characterization of a gene cluster for degradation of sialoglycoconjugates in Bacteroides fragilis strain YCH46." Nakayama H., Kuwahara T., Iwasa T., Okamoto S., Tsuchihashi Y., Nakanishi K., Kataoka K., Arimochi H., Ohnishi Y. Submitted (FEB-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: YCH46 EMBL BAC56907.2. |
| [2] | "Genomic analysis of Bacteroides fragilis reveals extensive DNA inversions regulating cell surface adaptation." Kuwahara T., Yamashita A., Hirakawa H., Nakayama H., Toh H., Okada N., Kuhara S., Hattori M., Hayashi T., Ohnishi Y. Proc. Natl. Acad. Sci. U.S.A. 101:14919-14924(2004) [PubMed: 15466707] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: YCH46. |
Cross-references
Sequence databases | |
|---|---|
| AB102772 Genomic DNA. Translation: BAC56907.2. AP006841 Genomic DNA. Translation: BAD48488.1. | |
| RefSeq | YP_099022.1. |
3D structure databases | |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | GH2. Glycoside Hydrolase Family 2. |
Genome annotation databases | |
| GeneID | 3082993. |
| GenomeReviews | Gene locus BF1741 in contig AP006841_GR. |
| KEGG | bfr:BF1741. |
| NMPDR | fig|295405.3.peg.2301. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | Q84ID1. |
| OMA | Q84ID1. WERVFRI. |
Enzyme and pathway databases | |
| BioCyc | BFRA295405:BF1741-MON. |
Family and domain databases | |
| InterPro | IPR013812. Glyco_hydro_2/20_Ig-like. IPR006104. Glyco_hydro_2_carb-bd. IPR013781. Glyco_hydro_sg_catalytic. [Graphical view] |
| Gene3D | G3DSA:2.60.40.320. Glyco_hydro_2/20_Ig-like. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. |
| Pfam | PF02837. Glyco_hydro_2_N. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q84ID1_BACFR | ||||||||
| Accession | Primary (citable) accession number: Q84ID1 Secondary accession number(s): Q64VI8 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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