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Protein
Submitted name:

ADP-ribose pyrophosphatase

Gene

ndx4

Organism
Thermus thermophilus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei104 – 1041AMP; via carbonyl oxygenCombined sources

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi28 – 292AMPCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseUniRule annotationSAAS annotation

Keywords - Ligandi

Nucleotide-bindingCombined sources

Enzyme and pathway databases

BRENDAi3.6.1.13. 2305.

Names & Taxonomyi

Protein namesi
Submitted name:
ADP-ribose pyrophosphataseImported
Gene namesi
Name:ndx4Imported
OrganismiThermus thermophilusImported
Taxonomic identifieri274 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Interactioni

Protein-protein interaction databases

STRINGi262724.TTC0160.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1V8IX-ray1.76A1-170[»]
1V8LX-ray2.10A1-170[»]
1V8MX-ray1.80A1-170[»]
1V8NX-ray1.74A1-170[»]
1V8RX-ray1.80A1-170[»]
1V8SX-ray2.20A1-170[»]
1V8TX-ray2.60A1-170[»]
1V8UX-ray1.90A1-170[»]
1V8VX-ray1.97A1-170[»]
1V8WX-ray1.66A1-170[»]
1V8YX-ray1.65A1-170[»]
ProteinModelPortaliQ84CU3.
SMRiQ84CU3. Positions 11-169.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ84CU3.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini32 – 158127Nudix hydrolaseInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the Nudix hydrolase family.UniRule annotation
Contains nudix hydrolase domain.SAAS annotation

Phylogenomic databases

eggNOGiENOG4108YZ4. Bacteria.
COG0494. LUCA.
KOiK01515.

Family and domain databases

Gene3Di3.90.79.10. 1 hit.
InterProiIPR020476. Nudix_hydrolase.
IPR020084. NUDIX_hydrolase_CS.
IPR000086. NUDIX_hydrolase_dom.
IPR015797. NUDIX_hydrolase_dom-like.
[Graphical view]
PfamiPF00293. NUDIX. 1 hit.
[Graphical view]
PRINTSiPR00502. NUDIXFAMILY.
SUPFAMiSSF55811. SSF55811. 1 hit.
PROSITEiPS51462. NUDIX. 1 hit.
PS00893. NUDIX_BOX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q84CU3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRVYYGGVE RTYLYRGRIL NLALEGRYEI VEHKPAVAVI ALREGRMLFV
60 70 80 90 100
RQMRPAVGLA PLEIPAGLIE PGEDPLEAAR RELAEETGLS GDLTYLFSYF
110 120 130 140 150
VSPGFTDEKT HVFLAENLKE VEAHPDEDEA IEVVWMRPEE ALERHQRGEV
160 170
EFSATGLVGV LYYHAFLRGR
Length:170
Mass (Da):19,264
Last modified:June 1, 2003 - v1
Checksum:iDA50D3135DDA7794
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB107660 Genomic DNA. Translation: BAC67698.1.
RefSeqiYP_143794.1. NC_006461.1.

Genome annotation databases

GeneIDi3169402.
KEGGittj:TTHA0528.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB107660 Genomic DNA. Translation: BAC67698.1.
RefSeqiYP_143794.1. NC_006461.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1V8IX-ray1.76A1-170[»]
1V8LX-ray2.10A1-170[»]
1V8MX-ray1.80A1-170[»]
1V8NX-ray1.74A1-170[»]
1V8RX-ray1.80A1-170[»]
1V8SX-ray2.20A1-170[»]
1V8TX-ray2.60A1-170[»]
1V8UX-ray1.90A1-170[»]
1V8VX-ray1.97A1-170[»]
1V8WX-ray1.66A1-170[»]
1V8YX-ray1.65A1-170[»]
ProteinModelPortaliQ84CU3.
SMRiQ84CU3. Positions 11-169.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi262724.TTC0160.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi3169402.
KEGGittj:TTHA0528.

Phylogenomic databases

eggNOGiENOG4108YZ4. Bacteria.
COG0494. LUCA.
KOiK01515.

Enzyme and pathway databases

BRENDAi3.6.1.13. 2305.

Miscellaneous databases

EvolutionaryTraceiQ84CU3.

Family and domain databases

Gene3Di3.90.79.10. 1 hit.
InterProiIPR020476. Nudix_hydrolase.
IPR020084. NUDIX_hydrolase_CS.
IPR000086. NUDIX_hydrolase_dom.
IPR015797. NUDIX_hydrolase_dom-like.
[Graphical view]
PfamiPF00293. NUDIX. 1 hit.
[Graphical view]
PRINTSiPR00502. NUDIXFAMILY.
SUPFAMiSSF55811. SSF55811. 1 hit.
PROSITEiPS51462. NUDIX. 1 hit.
PS00893. NUDIX_BOX. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ84CU3_THETH
AccessioniPrimary (citable) accession number: Q84CU3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: September 7, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.