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Protein

Gag polyprotein

Gene

gag

Organism
Puma lentivirus 14
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processHost-virus interaction, Viral budding, Viral budding via the host ESCRT complexesSAAS annotation, Viral release from host cell
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Gag polyproteinSAAS annotation
Gene namesi
Name:gagImported
OrganismiPuma lentivirus 14Imported
Taxonomic identifieri32615 [NCBI]
Taxonomic lineageiVirusesRetro-transcribing virusesRetroviridaeOrthoretrovirinaeLentivirusFeline lentivirus group

Subcellular locationi

  • Virion SAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

Capsid proteinSAAS annotation, Virion

Structurei

3D structure databases

ProteinModelPortaliQ84808
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini401 – 416CCHC-typeInterPro annotationAdd BLAST16
Domaini419 – 433CCHC-typeInterPro annotationAdd BLAST15

Keywords - Domaini

RepeatSAAS annotation, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Family and domain databases

Gene3Di1.10.1200.30, 1 hit
1.10.150.90, 1 hit
1.10.375.10, 1 hit
InterProiView protein in InterPro
IPR000721 Gag_p24
IPR012344 Matrix_HIV/RSV_N
IPR008916 Retrov_capsid_C
IPR008919 Retrov_capsid_N
IPR001878 Znf_CCHC
IPR036875 Znf_CCHC_sf
PfamiView protein in Pfam
PF00607 Gag_p24, 1 hit
PF00098 zf-CCHC, 2 hits
SMARTiView protein in SMART
SM00343 ZnF_C2HC, 2 hits
SUPFAMiSSF47943 SSF47943, 1 hit
SSF57756 SSF57756, 1 hit
PROSITEiView protein in PROSITE
PS50158 ZF_CCHC, 2 hits

Sequencei

Sequence statusi: Complete.

Q84808-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGNNQGKELK AALRRACNVT VGEGKRSKRY TEGNLMWAIK FGNACTGRDP
60 70 80 90 100
ADVPETLVEI RNFIHELQDK LQKFGGSKEL ENCIKTLKVL TVAGVLKLPC
110 120 130 140 150
QNTESAIKLY ETMGLLGPAT DKKIEENLEE KPAEAYPVQV ANGVHQHVSF
160 170 180 190 200
NPRTAAIWME KARGGLGSEE AVLWFTAFSA DLTATDMASL ITAAPGCAAD
210 220 230 240 250
KKIIDDKLKE LTAKYAQDHP DGPRPLPYFT AEEIMGIGIP QNVQSQPQYG
260 270 280 290 300
PARAQARLWF LEALGHLQKI KAGEPKAVTL RQGPKESYKD FIDRLFQQID
310 320 330 340 350
QEQASDEVRD YLKQSLSISN ANGECRKAMT HLRPESTLEE KLRACQDIGS
360 370 380 390 400
TQYKMQMLAE AFNQMQVNQV QRGGFRGGRG GNRGRGGRGR GRGRGLGPLN
410 420 430 440 450
CFNCGKPGHL ASQCRQPIKC YKCGGSGHLA IDCLGGNDSK NGQNRGTAAP
460 470
RQFQVQQNNT LYPSLKEMQT EPTAPPMEI
Length:479
Mass (Da):52,647
Last modified:November 1, 1996 - v1
Checksum:i21C4190013B21242
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U03982 Genomic DNA Translation: AAA67167.1

Similar proteinsi

Entry informationi

Entry nameiQ84808_9RETR
AccessioniPrimary (citable) accession number: Q84808
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 25, 2018
This is version 88 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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