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Q84771

- Q84771_FMDVO

UniProt

Q84771 - Q84771_FMDVO

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Protein
Submitted name:

Capsid proteins P88

Gene
N/A
Organism
Foot-and-mouth disease virus (isolate Bovine/Germany/O1Kaufbeuren/1966 serotype O) (FMDV)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural molecule activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Capsid proteins P88Imported
OrganismiFoot-and-mouth disease virus (isolate Bovine/Germany/O1Kaufbeuren/1966 serotype O) (FMDV)
Taxonomic identifieri73482 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stagePicornaviralesPicornaviridaeAphthovirus
Virus hostiBos taurus (Bovine) [TaxID: 9913]
Capra hircus (Goat) [TaxID: 9925]
Cervidae (deer) [TaxID: 9850]
Erinaceidae (hedgehogs) [TaxID: 9363]
Loxodonta africana (African elephant) [TaxID: 9785]
Ovis aries (Sheep) [TaxID: 9940]
Rattus norvegicus (Rat) [TaxID: 10116]
Sus scrofa (Pig) [TaxID: 9823]
ProteomesiUP000008765: Genome

Subcellular locationi

GO - Cellular componenti

  1. icosahedral viral capsid Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

Capsid proteinSAAS annotations, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini‹1 – 69›69 PredictedImportedPRO_5000145451Add
BLAST
Chaini70 – 287218 PredictedImportedPRO_5000145452Add
BLAST
Chaini288 – 507220 PredictedImportedPRO_5000145453Add
BLAST
Chaini508 – ›720›213 PredictedImportedPRO_5000145454Add
BLAST

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1BBTX-ray2.601508-720[»]
270-287[»]
3288-507[»]
1FODX-ray2.601508-720[»]
270-287[»]
3288-507[»]
1QQPX-ray1.901508-720[»]
270-287[»]
3288-507[»]
ProteinModelPortaliQ84771.

Miscellaneous databases

EvolutionaryTraceiQ84771.

Family & Domainsi

Family and domain databases

Gene3Di2.60.120.20. 3 hits.
4.10.90.10. 1 hit.
InterProiIPR015031. Capsid_VP4_Picornavir.
IPR004080. FMDV_VP1_coat.
IPR001676. Picornavirus_capsid.
IPR029053. Viral_coat.
[Graphical view]
PfamiPF00073. Rhv. 3 hits.
PF08935. VP4_2. 1 hit.
[Graphical view]
PRINTSiPR01542. FMDVP1COAT.

Sequencei

Sequence statusi: Fragment.

Q84771-1 [UniParc]FASTAAdd to Basket

« Hide

NTGSIINNYY MQQYQNSMDT QLGDNAISGG SNEGSTDTTS THTTNTQNND    50
WFSKLASSAF SGLFGALLAD KKTEETTLLE DRILTTRNGH TTSTTQSSVG 100
VTYGYATAED FVSGPNTSGL ETRVVQAERF FKTHLFDWVT SDSFGRCHLL 150
ELPTDHKGVY GSLTDSYAYM RNGWDVEVTA VGNQFNGGCL LVAMVPELYS 200
IQKRELYQLT LFPHQFINPR TNMTAHITVP FVGVNRYDQY KVHKPWTLVV 250
MVVAPLTVNT EGAPQIKVYA NIAPTNVHVA GEFPSKEGIF PVACSDGYGG 300
LVTTDPKTAD PVYGKVFNPP RNQLPGRFTN LLDVAEACPT FLRFEGGVPY 350
VTTKTDSDRV LAQFDMSLAA KQMSNTFLAG LAQYYTQYSG TINLHFMFTG 400
PTDAKARYMV AYAPPGMEPP KTPEAAAHCI HAEWDTGLNS KFTFSIPYLS 450
AADYAYTASG VAETTNVQGW VCLFQITHGK ADGDALVVLA SAGKDFELRL 500
PVDARAETTS AGESADPVTT TVENYGGETQ IQRRQHTDVS FIMDRFVKVT 550
PQNQINILDL MQIPSHTLVG ALLRASTYYF SDLEIAVKHE GDLTWVPNGA 600
PEKALDNTTN PTAYHKAPLT RLALPYTAPH RVLATVYNGE CRYNRNAVPN 650
LRGDLQVLAQ KVARTLPTSF NYGAIKATRV TELLYRMKRA ETYCPRPLLA 700
IHPTEARHKQ KIVAPVKQTL 720
Length:720
Mass (Da):79,294
Last modified:November 1, 1996 - v1
Checksum:i560453A47D25FF35
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported
Non-terminal residuei720 – 7201Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X00871 Genomic RNA. Translation: CAA25417.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X00871 Genomic RNA. Translation: CAA25417.1 .

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1BBT X-ray 2.60 1 508-720 [» ]
2 70-287 [» ]
3 288-507 [» ]
1FOD X-ray 2.60 1 508-720 [» ]
2 70-287 [» ]
3 288-507 [» ]
1QQP X-ray 1.90 1 508-720 [» ]
2 70-287 [» ]
3 288-507 [» ]
ProteinModelPortali Q84771.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Miscellaneous databases

EvolutionaryTracei Q84771.

Family and domain databases

Gene3Di 2.60.120.20. 3 hits.
4.10.90.10. 1 hit.
InterProi IPR015031. Capsid_VP4_Picornavir.
IPR004080. FMDV_VP1_coat.
IPR001676. Picornavirus_capsid.
IPR029053. Viral_coat.
[Graphical view ]
Pfami PF00073. Rhv. 3 hits.
PF08935. VP4_2. 1 hit.
[Graphical view ]
PRINTSi PR01542. FMDVP1COAT.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Nucleotide sequence and genome organization of foot-and-mouth disease virus."
    Forss S., Strebel K., Beck E., Schaller H.
    Nucleic Acids Res. 12:6587-6601(1984) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Isolate Bovine/Germany/O1Kaufbeuren/1966 serotype O.
  2. "Methods used in the structure determination of foot-and-mouth disease virus."
    Fry E., Acharya R., Stuart D.
    Acta Crystallogr. A 49 ( Pt 1):45-55(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.60 ANGSTROMS) OF 508-720; 70-287 AND 288-507.
  3. "Structure of a major immunogenic site on foot-and-mouth disease virus."
    Logan D., Abu-Ghazaleh R., Blakemore W., Curry S., Jackson T., King A., Lea S., Lewis R., Newman J., Parry N.
    Nature 362:566-568(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.60 ANGSTROMS) OF 508-720; 70-287 AND 288-507.
  4. "The structure and function of a foot-and-mouth disease virus-oligosaccharide receptor complex."
    Fry E.E., Lea S.M., Jackson T., Newman J.W., Ellard F.M., Blakemore W.E., Abu-Ghazaleh R., Samuel A., King A.M., Stuart D.I.
    EMBO J. 18:543-554(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS) OF 508-720; 70-287 AND 288-507.

Entry informationi

Entry nameiQ84771_FMDVO
AccessioniPrimary (citable) accession number: Q84771
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 9, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome

External Data

Dasty 3

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