Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q84771

- Q84771_FMDVO

UniProt

Q84771 - Q84771_FMDVO

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Capsid proteins P88

Gene
N/A
Organism
Foot-and-mouth disease virus (isolate Bovine/Germany/O1Kaufbeuren/1966 serotype O) (FMDV)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural molecule activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Capsid proteins P88Imported
OrganismiFoot-and-mouth disease virus (isolate Bovine/Germany/O1Kaufbeuren/1966 serotype O) (FMDV)Imported
Taxonomic identifieri73482 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stagePicornaviralesPicornaviridaeAphthovirus
Virus hostiBos taurus (Bovine) [TaxID: 9913]
Capra hircus (Goat) [TaxID: 9925]
Cervidae (deer) [TaxID: 9850]
Erinaceidae (hedgehogs) [TaxID: 9363]
Loxodonta africana (African elephant) [TaxID: 9785]
Ovis aries (Sheep) [TaxID: 9940]
Rattus norvegicus (Rat) [TaxID: 10116]
Sus scrofa (Pig) [TaxID: 9823]
ProteomesiUP000008765: Genome

Subcellular locationi

GO - Cellular componenti

  1. icosahedral viral capsid Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

Capsid proteinSAAS annotation, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini‹1 – 69›69 PotentialImportedPRO_5000145451Add
BLAST
Chaini70 – 287218 PotentialImportedPRO_5000145452Add
BLAST
Chaini288 – 507220 PotentialImportedPRO_5000145453Add
BLAST
Chaini508 – ›720›213 PotentialImportedPRO_5000145454Add
BLAST

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1BBTX-ray2.601508-720[»]
270-287[»]
3288-507[»]
1FODX-ray2.601508-720[»]
270-287[»]
3288-507[»]
ProteinModelPortaliQ84771.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ84771.

Family & Domainsi

Family and domain databases

Gene3Di2.60.120.20. 3 hits.
4.10.90.10. 1 hit.
InterProiIPR015031. Capsid_VP4_Picornavir.
IPR004080. FMDV_VP1_coat.
IPR001676. Picornavirus_capsid.
IPR029053. Viral_coat.
[Graphical view]
PfamiPF00073. Rhv. 3 hits.
PF08935. VP4_2. 1 hit.
[Graphical view]
PRINTSiPR01542. FMDVP1COAT.

Sequencei

Sequence statusi: Fragment.

Q84771-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
NTGSIINNYY MQQYQNSMDT QLGDNAISGG SNEGSTDTTS THTTNTQNND
60 70 80 90 100
WFSKLASSAF SGLFGALLAD KKTEETTLLE DRILTTRNGH TTSTTQSSVG
110 120 130 140 150
VTYGYATAED FVSGPNTSGL ETRVVQAERF FKTHLFDWVT SDSFGRCHLL
160 170 180 190 200
ELPTDHKGVY GSLTDSYAYM RNGWDVEVTA VGNQFNGGCL LVAMVPELYS
210 220 230 240 250
IQKRELYQLT LFPHQFINPR TNMTAHITVP FVGVNRYDQY KVHKPWTLVV
260 270 280 290 300
MVVAPLTVNT EGAPQIKVYA NIAPTNVHVA GEFPSKEGIF PVACSDGYGG
310 320 330 340 350
LVTTDPKTAD PVYGKVFNPP RNQLPGRFTN LLDVAEACPT FLRFEGGVPY
360 370 380 390 400
VTTKTDSDRV LAQFDMSLAA KQMSNTFLAG LAQYYTQYSG TINLHFMFTG
410 420 430 440 450
PTDAKARYMV AYAPPGMEPP KTPEAAAHCI HAEWDTGLNS KFTFSIPYLS
460 470 480 490 500
AADYAYTASG VAETTNVQGW VCLFQITHGK ADGDALVVLA SAGKDFELRL
510 520 530 540 550
PVDARAETTS AGESADPVTT TVENYGGETQ IQRRQHTDVS FIMDRFVKVT
560 570 580 590 600
PQNQINILDL MQIPSHTLVG ALLRASTYYF SDLEIAVKHE GDLTWVPNGA
610 620 630 640 650
PEKALDNTTN PTAYHKAPLT RLALPYTAPH RVLATVYNGE CRYNRNAVPN
660 670 680 690 700
LRGDLQVLAQ KVARTLPTSF NYGAIKATRV TELLYRMKRA ETYCPRPLLA
710 720
IHPTEARHKQ KIVAPVKQTL
Length:720
Mass (Da):79,294
Last modified:November 1, 1996 - v1
Checksum:i560453A47D25FF35
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported
Non-terminal residuei720 – 7201Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X00871 Genomic RNA. Translation: CAA25417.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X00871 Genomic RNA. Translation: CAA25417.1 .

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1BBT X-ray 2.60 1 508-720 [» ]
2 70-287 [» ]
3 288-507 [» ]
1FOD X-ray 2.60 1 508-720 [» ]
2 70-287 [» ]
3 288-507 [» ]
ProteinModelPortali Q84771.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Miscellaneous databases

EvolutionaryTracei Q84771.

Family and domain databases

Gene3Di 2.60.120.20. 3 hits.
4.10.90.10. 1 hit.
InterProi IPR015031. Capsid_VP4_Picornavir.
IPR004080. FMDV_VP1_coat.
IPR001676. Picornavirus_capsid.
IPR029053. Viral_coat.
[Graphical view ]
Pfami PF00073. Rhv. 3 hits.
PF08935. VP4_2. 1 hit.
[Graphical view ]
PRINTSi PR01542. FMDVP1COAT.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Nucleotide sequence and genome organization of foot-and-mouth disease virus."
    Forss S., Strebel K., Beck E., Schaller H.
    Nucleic Acids Res. 12:6587-6601(1984) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Isolate Bovine/Germany/O1Kaufbeuren/1966 serotype OImported.
  2. "Methods used in the structure determination of foot-and-mouth disease virus."
    Fry E., Acharya R., Stuart D.
    Acta Crystallogr. A 49 ( Pt 1):45-55(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.60 ANGSTROMS) OF 508-720; 70-287 AND 288-507.
  3. "Structure of a major immunogenic site on foot-and-mouth disease virus."
    Logan D., Abu-Ghazaleh R., Blakemore W., Curry S., Jackson T., King A., Lea S., Lewis R., Newman J., Parry N.
    Nature 362:566-568(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.60 ANGSTROMS) OF 508-720; 70-287 AND 288-507.

Entry informationi

Entry nameiQ84771_FMDVO
AccessioniPrimary (citable) accession number: Q84771
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: October 29, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteomeImported

External Data

Dasty 3