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Q84771 (Q84771_FMDVO) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length720 AA.
Sequence statusFragment.
Protein existenceEvidence at protein level

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain‹1 – 69›69 Potential EMBL CAA25417.1
PRO_5000145451
Chain70 – 287218 Potential EMBL CAA25417.1
PRO_5000145452
Chain288 – 507220 Potential EMBL CAA25417.1
PRO_5000145453
Chain508 – ›720›213 Potential EMBL CAA25417.1
PRO_5000145454

Experimental info

Non-terminal residue11 EMBL CAA25417.1
Non-terminal residue7201 EMBL CAA25417.1

Sequences

Sequence LengthMass (Da)Tools
Q84771 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 560453A47D25FF35

FASTA72079,294
        10         20         30         40         50         60 
NTGSIINNYY MQQYQNSMDT QLGDNAISGG SNEGSTDTTS THTTNTQNND WFSKLASSAF 

        70         80         90        100        110        120 
SGLFGALLAD KKTEETTLLE DRILTTRNGH TTSTTQSSVG VTYGYATAED FVSGPNTSGL 

       130        140        150        160        170        180 
ETRVVQAERF FKTHLFDWVT SDSFGRCHLL ELPTDHKGVY GSLTDSYAYM RNGWDVEVTA 

       190        200        210        220        230        240 
VGNQFNGGCL LVAMVPELYS IQKRELYQLT LFPHQFINPR TNMTAHITVP FVGVNRYDQY 

       250        260        270        280        290        300 
KVHKPWTLVV MVVAPLTVNT EGAPQIKVYA NIAPTNVHVA GEFPSKEGIF PVACSDGYGG 

       310        320        330        340        350        360 
LVTTDPKTAD PVYGKVFNPP RNQLPGRFTN LLDVAEACPT FLRFEGGVPY VTTKTDSDRV 

       370        380        390        400        410        420 
LAQFDMSLAA KQMSNTFLAG LAQYYTQYSG TINLHFMFTG PTDAKARYMV AYAPPGMEPP 

       430        440        450        460        470        480 
KTPEAAAHCI HAEWDTGLNS KFTFSIPYLS AADYAYTASG VAETTNVQGW VCLFQITHGK 

       490        500        510        520        530        540 
ADGDALVVLA SAGKDFELRL PVDARAETTS AGESADPVTT TVENYGGETQ IQRRQHTDVS 

       550        560        570        580        590        600 
FIMDRFVKVT PQNQINILDL MQIPSHTLVG ALLRASTYYF SDLEIAVKHE GDLTWVPNGA 

       610        620        630        640        650        660 
PEKALDNTTN PTAYHKAPLT RLALPYTAPH RVLATVYNGE CRYNRNAVPN LRGDLQVLAQ 

       670        680        690        700        710        720 
KVARTLPTSF NYGAIKATRV TELLYRMKRA ETYCPRPLLA IHPTEARHKQ KIVAPVKQTL 

« Hide

References

« Hide 'large scale' references
[1]"Nucleotide sequence and genome organization of foot-and-mouth disease virus."
Forss S., Strebel K., Beck E., Schaller H.
Nucleic Acids Res. 12:6587-6601(1984) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Isolate Bovine/Germany/O1Kaufbeuren/1966 serotype O.
[2]"Methods used in the structure determination of foot-and-mouth disease virus."
Fry E., Acharya R., Stuart D.
Acta Crystallogr. A 49 ( Pt 1):45-55(1993) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.60 ANGSTROMS) OF 508-720; 70-287 AND 288-507.
[3]"Structure of a major immunogenic site on foot-and-mouth disease virus."
Logan D., Abu-Ghazaleh R., Blakemore W., Curry S., Jackson T., King A., Lea S., Lewis R., Newman J., Parry N.
Nature 362:566-568(1993) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.60 ANGSTROMS) OF 508-720; 70-287 AND 288-507.
[4]"The structure and function of a foot-and-mouth disease virus-oligosaccharide receptor complex."
Fry E.E., Lea S.M., Jackson T., Newman J.W., Ellard F.M., Blakemore W.E., Abu-Ghazaleh R., Samuel A., King A.M., Stuart D.I.
EMBO J. 18:543-554(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS) OF 508-720; 70-287 AND 288-507.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X00871 Genomic RNA. Translation: CAA25417.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1BBTX-ray2.601508-720[»]
270-287[»]
3288-507[»]
1FODX-ray2.601508-720[»]
270-287[»]
3288-507[»]
1QQPX-ray1.901508-720[»]
270-287[»]
3288-507[»]
ProteinModelPortalQ84771.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D4.10.90.10. 1 hit.
InterProIPR015031. Capsid_VP4_Picornavir.
IPR004080. FMDV_VP1_coat.
IPR001676. Picornavirus_capsid.
[Graphical view]
PfamPF00073. Rhv. 3 hits.
PF08935. VP4_2. 1 hit.
[Graphical view]
PRINTSPR01542. FMDVP1COAT.
ProtoNetSearch...

Other

EvolutionaryTraceQ84771.

Entry information

Entry nameQ84771_FMDVO
AccessionPrimary (citable) accession number: Q84771
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: January 22, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)