Q84535 (Q84535_PBCV1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alkaline alginate lyas / 1-4 polyglucuronic acid lysase / polysaccharide lyase family 14 / vAL-1 EMBL AAC96583.2

Gene names

Name:

A215L EMBL AAC96583.2

Organism

Paramecium bursaria Chlorella virus 1 (PBCV-1) EMBL AAC96583.2

Taxonomic identifier

10506 [NCBI]

Taxonomic lineage

Viruses › dsDNA viruses, no RNA stage › Phycodnaviridae › Chlorovirus

Virus host

Chlorella [TaxID: 114049]

Protein attributes

Sequence length	321 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL AAC96583.2
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	lyase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q84535 [UniParc]. Last modified March 1, 2001. Version 2. Checksum: A17997AFCCFB80CA	FASTA	321	35,707
	10 20 30 40 50 60 MNGNDNWDNV VKDYNNLRKN GHDEQETISI IRRKYTDIGP VNQKRLEDQY EKIKPSQKPA 70 80 90 100 110 120 PKPAPKTAPK SPPATKNTNV ISTLDLNLLT KGGGSWNVDG VNMKKSAVTT FDGKRVVKAV 130 140 150 160 170 180 YDKNSGTSAN PGVGGFSFSA VPDGLNKNAI TFAWEVFYPK GFDFARGGKH GGTFIGHGAA 190 200 210 220 230 240 SGYQHSKTGA SNRIMWQQDG GVIDYIYPPS DLKQKIRGLD PEGHGIGFFE DDFKKALKYD 250 260 270 280 290 300 VWNRIEIGTK MNTFKNGVPQ LDGESYVIVN GKKEVLKGIN WSRSPDLVIN RFDWNTFFGG 310 320 PLPSPKNQVA YFTNFQMKKY E

References

[1]	"Analysis of 45 kb of DNA located at the left end of the chlorella virus PBCV-1 genome." Lu Z., Li Y., Zhang Y., Kutish G.F., Rock D.L., van Etten J.L. Virology 206:339-352(1995) [PubMed: 7831789] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Analysis of 43 kb of the Chlorella virus PBCV-1 330-kb genome: map positions 45 to 88." Li Y., Lu Z., Burbank D.E., Kutish G.F., Rock D.L., Etten J.L. Virology 212:134-150(1995) [PubMed: 7676624] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[3]	"Analysis of 94 kb of the chlorella virus PBCV-1 330-kb genome: map positions 88 to 182." Lu Z., Li Y., Que Q., Kutish G.F., Rock D.L., van Etten J.L. Virology 216:102-123(1996) [PubMed: 8614977] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[4]	"Analysis of 76 kb of the chlorella virus PBCV-1 330-kb genome: map positions 182 to 258." Kutish G.F., Li Y., Lu Z., Furuta M., Rock D.L., van Etten J.L. Virology 223:303-317(1996) [PubMed: 8806566] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[5]	"Analysis of 74 kb of DNA located at the right end of the 330-kb chlorella virus PBCV-1 genome." Li Y., Lu Z., Sun L., Ropp S., Kutish G.F., Rock D.L., van Etten J.L. Virology 237:360-377(1997) [PubMed: 9356347] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[6]	"Chlorella virus PBCV-1 encodes a functional homospermidine synthase." Kaiser A., Vollmert M., Tholl D., Graves M.V., Gurnon J.R., Xing W., Lisec A.D., Nickerson K.W., Van Etten J.L. Virology 263:254-262(1999) [PubMed: 10544099] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[7]	"Characterization of a beta-1,3-glucanase encoded by chlorella virus PBCV-1." Sun L., Gurnon J.R., Adams B.J., Graves M.V., Van Etten J.L. Virology 276:27-36(2000) [PubMed: 11021991] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[8]	"Microarray analysis of Paramecium bursaria chlorella virus 1 transcription." Yanai-Balser G.M., Duncan G.A., Eudy J.D., Wang D., Li X., Agarkova I.V., Dunigan D.D., Van Etten J.L. J. Virol. 84:532-542(2010) [PubMed: 19828609] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[9]	"Paramecium bursaria Chlorella virus 1 proteome reveals novel architectural and regulatory features of a giant virus." Dunigan D.D., Blanc G., Duncan G.A., Gurnon J.R., Jeanniard A., McClung O.W., Upton C., Van Etten J.L. Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	JF411744 Genomic DNA. Translation: AAC96583.2.
PIR	T17705.
RefSeq	NP_048562.2. NC_000852.5.
3D structure databases
ModBase	Search...
Protein family/group databases
CAZy	PL14. Polysaccharide Lyase Family 14.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	917994.
Phylogenomic databases
ProtClustDB	CLSP2511298.
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

Q84535_PBCV1

Accession

Primary (citable) accession number: Q84535

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	March 1, 2001
Last modified:	October 19, 2011
This is version 35 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)