Q84527 (Q84527_PBCV1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Arginine/Ornithine decarboxylase EMBL AAC96575.1

Gene names

Name:

A207R EMBL AAC96575.1

Organism

Paramecium bursaria Chlorella virus 1 (PBCV-1) EMBL AAC96575.1

Taxonomic identifier

10506 [NCBI]

Taxonomic lineage

Viruses › dsDNA viruses, no RNA stage › Phycodnaviridae › Chlorovirus

Virus host

Chlorella [TaxID: 114049]

Protein attributes

Sequence length	372 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 2NVA PDB 2NV9 Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	polyamine biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q84527 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: 3CE0ED02394297E2	FASTA	372	41,969
	10 20 30 40 50 60 MNSVVNNILK AHPHQTKSFY VSSPKIVEDL IDQWTILFPR VTPHYAVKCN NDEVLLKTMC 70 80 90 100 110 120 DKNVNFDCAS SSEIKKVIQI GVSPSRIIFA HTMKTIDDLI FAKDQGVDIA TFDSSFELDK 130 140 150 160 170 180 IHTYHPNCKM ILRIRCDDPN ATVQLGNKFG ANEDEIRHLL EYAKQLDIEV IGISFHVGSG 190 200 210 220 230 240 SRNPEAYYRA IKSSKEAFNE AISVGHKPYI LDIGGGLHAD IDEGELSTYM SDYINDAIKD 250 260 270 280 290 300 FFPEDTVTIV AEPGRFFAEH YSVLATQVIG KRVRDGLYEY FFNESTYGGF SNVIFEKSVP 310 320 330 340 350 360 TPQLLRDVPD DEEYVPSVLY GCTCDGVDVI NHNVALPELH IGDWVYFPSW GAYTNVLTTS 370 FNGFGEYDVY YI

References

[1]	"Analysis of 45 kb of DNA located at the left end of the chlorella virus PBCV-1 genome." Lu Z., Li Y., Zhang Y., Kutish G.F., Rock D.L., van Etten J.L. Virology 206:339-352(1995) [PubMed: 7831789] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Analysis of 43 kb of the Chlorella virus PBCV-1 330-kb genome: map positions 45 to 88." Li Y., Lu Z., Burbank D.E., Kutish G.F., Rock D.L., Etten J.L. Virology 212:134-150(1995) [PubMed: 7676624] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[3]	"Analysis of 94 kb of the chlorella virus PBCV-1 330-kb genome: map positions 88 to 182." Lu Z., Li Y., Que Q., Kutish G.F., Rock D.L., van Etten J.L. Virology 216:102-123(1996) [PubMed: 8614977] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[4]	"Analysis of 76 kb of the chlorella virus PBCV-1 330-kb genome: map positions 182 to 258." Kutish G.F., Li Y., Lu Z., Furuta M., Rock D.L., van Etten J.L. Virology 223:303-317(1996) [PubMed: 8806566] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[5]	"Analysis of 74 kb of DNA located at the right end of the 330-kb chlorella virus PBCV-1 genome." Li Y., Lu Z., Sun L., Ropp S., Kutish G.F., Rock D.L., van Etten J.L. Virology 237:360-377(1997) [PubMed: 9356347] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[6]	"Chlorella virus PBCV-1 encodes a functional homospermidine synthase." Kaiser A., Vollmert M., Tholl D., Graves M.V., Gurnon J.R., Xing W., Lisec A.D., Nickerson K.W., Van Etten J.L. Virology 263:254-262(1999) [PubMed: 10544099] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[7]	"Characterization of a beta-1,3-glucanase encoded by chlorella virus PBCV-1." Sun L., Gurnon J.R., Adams B.J., Graves M.V., Van Etten J.L. Virology 276:27-36(2000) [PubMed: 11021991] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[8]	"Microarray analysis of Paramecium bursaria chlorella virus 1 transcription." Yanai-Balser G.M., Duncan G.A., Eudy J.D., Wang D., Li X., Agarkova I.V., Dunigan D.D., Van Etten J.L. J. Virol. 84:532-542(2010) [PubMed: 19828609] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[9]	"Paramecium bursaria Chlorella virus 1 proteome reveals novel architectural and regulatory features of a giant virus." Dunigan D.D., Blanc G., Duncan G.A., Gurnon J.R., Jeanniard A., McClung O.W., Upton C., Van Etten J.L. Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[10]	"X-ray structure of Paramecium bursaria Chlorella virus arginine decarboxylase: insight into the structural basis for substrate specificity." Shah R., Akella R., Goldsmith E.J., Phillips M.A. Biochemistry 46:2831-2841(2007) [PubMed: 17305368] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS).
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

JF411744 Genomic DNA. Translation: AAC96575.1.

PIR

T17697.

RefSeq

NP_048554.1. NC_000852.5.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2NV9	X-ray	1.95	A/B/C/D/E/F/G/H	1-372	[»]
2NVA	X-ray	1.80	A/B/C/D/E/F/G/H	1-372	[»]

ProteinModelPortal

Q84527.

SMR

Q84527. Positions 1-372.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

917923.

Phylogenomic databases

ProtClustDB

CLSP2510533.

Family and domain databases

InterPro

IPR009006. Ala_racemase/Decarboxylase_C.
IPR022643. De-COase2_C.
IPR022644. De-COase2_N.
IPR000183. Orn/DAP/Arg_de-COase.
IPR002433. Orn_de-COase.
[Graphical view]

Gene3D

G3DSA:2.40.37.10. Ala_racemase/Decarboxylase_C. 1 hit.

Pfam

PF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view]

PRINTS

PR01179. ODADCRBXLASE.
PR01182. ORNDCRBXLASE.

SUPFAM

SSF50621. Racem_decarbox_C. 1 hit.

ProtoNet

Search...

Entry information

Entry name

Q84527_PBCV1

Accession

Primary (citable) accession number: Q84527

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	November 1, 1996
Last modified:	October 19, 2011
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)