Q840C0 (Q840C0_9GAMM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endo-b1,4-mannanase 5C EMBL AAO31761.1

Gene names

Name:

man5C EMBL AAO31761.1

Organism

Cellvibrio japonicus EMBL AAO31761.1

Taxonomic identifier

155077 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Cellvibrio

Protein attributes

Sequence length	830 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 2BGO PDB 2BGP
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q840C0 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 9574A9C545B2973E	FASTA	830	89,231
	10 20 30 40 50 60 MKHLISPRIL TGLFVIGLGG QAVADCNAPA WSSTTQYKGG EAVVYQGGAF KARWWANVGV 70 80 90 100 110 120 APDTSNPWDV WQFIQPCSSG GNSSSVQASA SVSSSGIIVG AQCNWYGNSY PVCQQAASGW 130 140 150 160 170 180 GWENQQSCIA YADCASLPAP YGVMGGNSSS VLSGSSVSSS SRLSSSSSIP LSSSLPSSSS 190 200 210 220 230 240 SVSSIASSSL SSSSSSMAVP EGNSWTYTAA SASITAPAQL VGNVGELQGA GSAVIWNVDV 250 260 270 280 290 300 PVTGEYRINL TWSSPYSSKV NTLVMDGTAL SYAFAEATVP VTYVQTKTLS AGNHSFGVRV 310 320 330 340 350 360 GSSDWGYMNV HSLKLELLGG LTIRSPANFA QLPSGSNIQV VYEKQGSGRL TYSVNDGATQ 370 380 390 400 410 420 LYGGESPLTI PTQGDGVYRL KFGLEGTVLS SNLRVTVGSA NVPEFVEASG TQFVLGNKPF 430 440 450 460 470 480 YFNGSNQYYL MYKPEPMAND FFARAKALDM KVVRTWMFCN SSSTHDGVCI NKKSGSSFIL 490 500 510 520 530 540 VKPESERTAD EKALITRSFE RFDNYVAQAE ANDMRLVLSL SDYWDYFGKI EDYGPYGSAS 550 560 570 580 590 600 GRALFKTFIT NLLNHVNPLT GKAYKDDPTI MMWELANEPR YTTGNFADFK VWVADIAAHI 610 620 630 640 650 660 KSIAPHQLVS IGSESSFGIA LDDTYASLVE LNRDPNIDAI SAHLYPTSWR MTDEQVLSNI 670 680 690 700 710 720 QKLADLAREV GKPAYIGELG WPAHAQRTTG SNFIELSSFT DQAAVDSFVS ISLTQRANYM 730 740 750 760 770 780 ESWYAKAYAN KDAIGGFLIW QLSGKEWGNG GTPLRGCQWC AGPYGEPTGG WSGNHDGYQF 790 800 810 820 830 YCALNEAEMS LTQLGALGSN KEGDKIHMDL HKLSCDVMKA YSGKYRSLMQ

References

[1]	"The modular architecture of Cellvibrio japonicus mannanases in glycoside hydrolase families 5 and 26 points to differences in their role in mannan degradation." Hogg D., Pell G., Dupree P., Goubet F., Martin-Orue S.M., Armand S., Gilbert H.J. Biochem. J. 371:1027-1043(2003) [PubMed: 12523937] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Structure of a mannan-specific family 35 carbohydrate-binding module: evidence for significant conformational changes upon ligand binding." Tunnicliffe R.B., Bolam D.N., Pell G., Gilbert H.J., Williamson M.P. J. Mol. Biol. 347:287-296(2005) [PubMed: 15740741] [Abstract] Cited for: STRUCTURE BY NMR OF 197-328.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AY187033 Genomic DNA. Translation: AAO31761.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2BGO	NMR	-	A	197-328	[»]
2BGP	NMR	-	A	197-328	[»]

ProteinModelPortal

Q840C0.

SMR

Q840C0. Positions 99-146, 204-319.

ModBase

Search...

Protein family/group databases

CAZy

CBM10. Carbohydrate-Binding Module Family 10.
CBM35. Carbohydrate-Binding Module Family 35.
CBM5. Carbohydrate-Binding Module Family 5.
GH5. Glycoside Hydrolase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Family and domain databases

InterPro

IPR002883. CBM10/Dockerin_dom.
IPR009031. CBM_fam10.
IPR003610. CBM_fam5/12.
IPR008979. Galactose-bd-like.
IPR001547. Glyco_hydro_5.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]

Gene3D

G3DSA:2.10.10.20. G3DSA:2.10.10.20. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
G3DSA:2.30.32.30. TypeX_cellulose-bd_reg_CBDX. 1 hit.

Pfam

PF02013. CBM_10. 1 hit.
PF02839. CBM_5_12. 1 hit.
PF00150. Cellulase. 1 hit.
[Graphical view]

SMART

SM01064. CBM_10. 1 hit.
SM00495. ChtBD3. 1 hit.
[Graphical view]

SUPFAM

SSF57615. CBDX. 1 hit.
SSF51055. CBM_5_12. 1 hit.
SSF49785. Gal_bind_like. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.

ProtoNet

Search...

Entry information

Entry name

Q840C0_9GAMM

Accession

Primary (citable) accession number: Q840C0

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	January 25, 2012
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)