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Q83RB4

- Q83RB4_SHIFL

UniProt

Q83RB4 - Q83RB4_SHIFL

Protein

Superoxide dismutase [Cu-Zn]

Gene

sodC

Organism
Shigella flexneri
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 92 (01 Oct 2014)
      Sequence version 4 (05 Jul 2005)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    Cofactori

    Binds 1 copper ion per subunit.UniRule annotation
    Binds 1 zinc ion per subunit.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotation

    Keywords - Ligandi

    CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodCImported
    Ordered Locus Names:S1805Imported, SF1673Imported
    OrganismiShigella flexneriImported
    Taxonomic identifieri623 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeShigella
    ProteomesiUP000002673: Chromosome, UP000001006: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi198214.SF1673.

    Structurei

    3D structure databases

    SMRiQ83RB4. Positions 25-178.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000263449.
    KOiK04565.
    OrthoDBiEOG6K13RS.

    Family and domain databases

    Gene3Di2.60.40.200. 1 hit.
    InterProiIPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view]
    PfamiPF00080. Sod_Cu. 1 hit.
    [Graphical view]
    SUPFAMiSSF49329. SSF49329. 1 hit.
    PROSITEiPS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q83RB4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNGGPMKRFS LAILALVVAT GAQAASEKVE MNLVTSQGVG QSIGSVTITE    50
    TDKGLEFSPD LKALPPGEHG FHIHAKGSCQ PATKDGKASA AESAGGHLDP 100
    QNTGKHEGPE GTGHLGDLPA LVVNNDGKAT DAVIAPRLKS LDEIKDKALM 150
    VHVGGDNMSD QPKPLGGGGE RYACGVIK 178
    Length:178
    Mass (Da):18,168
    Last modified:July 5, 2005 - v4
    Checksum:iDC43B64712E8FA65
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE005674 Genomic DNA. Translation: AAN43254.2.
    AE014073 Genomic DNA. Translation: AAP17140.1.
    RefSeqiNP_707547.2. NC_004337.2.
    NP_837333.1. NC_004741.1.

    Genome annotation databases

    EnsemblBacteriaiAAN43254; AAN43254; SF1673.
    AAP17140; AAP17140; S1805.
    GeneIDi1024862.
    1079362.
    KEGGisfl:SF1673.
    sfx:S1805.
    PATRICi18704998. VBIShiFle31049_1997.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE005674 Genomic DNA. Translation: AAN43254.2 .
    AE014073 Genomic DNA. Translation: AAP17140.1 .
    RefSeqi NP_707547.2. NC_004337.2.
    NP_837333.1. NC_004741.1.

    3D structure databases

    SMRi Q83RB4. Positions 25-178.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 198214.SF1673.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAN43254 ; AAN43254 ; SF1673 .
    AAP17140 ; AAP17140 ; S1805 .
    GeneIDi 1024862.
    1079362.
    KEGGi sfl:SF1673.
    sfx:S1805.
    PATRICi 18704998. VBIShiFle31049_1997.

    Phylogenomic databases

    HOGENOMi HOG000263449.
    KOi K04565.
    OrthoDBi EOG6K13RS.

    Family and domain databases

    Gene3Di 2.60.40.200. 1 hit.
    InterProi IPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view ]
    Pfami PF00080. Sod_Cu. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49329. SSF49329. 1 hit.
    PROSITEi PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157."
      Jin Q., Yuan Z., Xu J., Wang Y., Shen Y., Lu W., Wang J., Liu H., Yang J., Yang F., Zhang X., Zhang J., Yang G., Wu H., Qu D., Dong J., Sun L., Xue Y.
      , Zhao A., Gao Y., Zhu J., Kan B., Ding K., Chen S., Cheng H., Yao Z., He B., Chen R., Ma D., Qiang B., Wen Y., Hou Y., Yu J.
      Nucleic Acids Res. 30:4432-4441(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 301Imported, 301 / Serotype 2aImported and ATCC 700930 / 2457T / Serotype 2aImported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 2457TImported and 301 / Serotype 2a.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 301Imported.

    Entry informationi

    Entry nameiQ83RB4_SHIFL
    AccessioniPrimary (citable) accession number: Q83RB4
    Secondary accession number(s): Q7UCE0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2003
    Last sequence update: July 5, 2005
    Last modified: October 1, 2014
    This is version 92 of the entry and version 4 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3