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Q83RB4 (Q83RB4_SHIFL) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 88. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Superoxide dismutase [Cu-Zn] RuleBase RU000393

EC=1.15.1.1 RuleBase RU000393
Gene names
Name:sodC EMBL AAN43254.2
Ordered Locus Names:S1805 EMBL AAP17140.1, SF1673 EMBL AAN43254.2
OrganismShigella flexneri [Complete proteome] [HAMAP]
Taxonomic identifier623 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeShigella

Protein attributes

Sequence length178 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393

Cofactor

Binds 1 copper ion per subunit By similarity. RuleBase RU000393

Binds 1 zinc ion per subunit By similarity. RuleBase RU000393

Sequence similarities

Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393

Sequences

Sequence LengthMass (Da)Tools
Q83RB4 [UniParc].

Last modified July 5, 2005. Version 4.
Checksum: DC43B64712E8FA65

FASTA17818,168
        10         20         30         40         50         60 
MNGGPMKRFS LAILALVVAT GAQAASEKVE MNLVTSQGVG QSIGSVTITE TDKGLEFSPD 

        70         80         90        100        110        120 
LKALPPGEHG FHIHAKGSCQ PATKDGKASA AESAGGHLDP QNTGKHEGPE GTGHLGDLPA 

       130        140        150        160        170 
LVVNNDGKAT DAVIAPRLKS LDEIKDKALM VHVGGDNMSD QPKPLGGGGE RYACGVIK 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157."
Jin Q., Yuan Z., Xu J., Wang Y., Shen Y., Lu W., Wang J., Liu H., Yang J., Yang F., Zhang X., Zhang J., Yang G., Wu H., Qu D., Dong J., Sun L., Xue Y. expand/collapse author list , Zhao A., Gao Y., Zhu J., Kan B., Ding K., Chen S., Cheng H., Yao Z., He B., Chen R., Ma D., Qiang B., Wen Y., Hou Y., Yu J.
Nucleic Acids Res. 30:4432-4441(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 301 EMBL AAN43254.2 and 301 / Serotype 2a.
[2]"Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T."
Wei J., Goldberg M.B., Burland V., Venkatesan M.M., Deng W., Fournier G., Mayhew G.F., Plunkett G.III., Rose D.J., Darling A., Mau B., Perna N.T., Payne S.M., Runyen-Janecky L.J., Zhou S., Schwartz D.C., Blattner F.R.
Infect. Immun. 71:2775-2786(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 2457T EMBL AAP17140.1 and ATCC 700930 / 2457T / Serotype 2a.
[3]Jin Q., Shen Y., Wang J.H., Liu H., Yang J., Yang F., Zhang X.B., Zhang J.Y., Yang G.W., Wu H.T., Dong J., Sun L.L., Xue Y., Zhao A.L., Gao Y.S., Zhu J.P., Chen S.X., Yao Z.J. expand/collapse author list , Wang Y., Lu W.C., Qiang B.Q., Wen Y.M., Hou Y.D.
Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 301 EMBL AAN43254.2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE005674 Genomic DNA. Translation: AAN43254.2.
AE014073 Genomic DNA. Translation: AAP17140.1.
RefSeqNP_707547.2. NC_004337.2.
NP_837333.1. NC_004741.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING198214.SF1673.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAN43254; AAN43254; SF1673.
AAP17140; AAP17140; S1805.
GeneID1024862.
1079362.
KEGGsfl:SF1673.
sfx:S1805.
PATRIC18704998. VBIShiFle31049_1997.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000263449.
KOK04565.
OrthoDBEOG6K13RS.
ProtClustDBPRK10290.

Family and domain databases

Gene3D2.60.40.200. 1 hit.
InterProIPR024134. SOD_Cu/Zn_/chaperone.
IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PANTHERPTHR10003. PTHR10003. 1 hit.
PfamPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMSSF49329. SSF49329. 1 hit.
PROSITEPS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ83RB4_SHIFL
AccessionPrimary (citable) accession number: Q83RB4
Secondary accession number(s): Q7UCE0
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: July 5, 2005
Last modified: April 16, 2014
This is version 88 of the entry and version 4 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)