Q83R27 (Q83R27_SHIFL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Flagellar biosynthetic protein fliR RuleBase RU003842

Gene names

Name:	fliR EMBL AAN43542.2
Ordered Locus Names:	S2089 EMBL AAP17368.1, SF1995 EMBL AAN43542.2

Organism

Shigella flexneri [Complete proteome] [HAMAP]

Taxonomic identifier

623 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Shigella

Protein attributes

Sequence length	261 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Role in flagellar biosynthesis By similarity. RuleBase RU003842
Subcellular location	Membrane; Multi-pass membrane protein By similarity RuleBase RU003841.
Sequence similarities	Belongs to the fliR/mopE/spaR family. RuleBase RU003841

Ontologies

Keywords
Cellular component	Bacterial flagellum RuleBase RU003842 Cell projection Cilium Flagellum EMBL AAN43542.2 Membrane
Domain	Transmembrane RuleBase RU003841
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	protein targeting Inferred from electronic annotation. Source: InterPro
Cellular_component	bacterial-type flagellum Inferred from electronic annotation. Source: UniProtKB-KW integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q83R27 [UniParc]. Last modified February 1, 2005. Version 2. Checksum: 13848923B2F7A125	FASTA	261	28,549
	10 20 30 40 50 60 MMQETSDQWL SWLSLYFWPL LRVLALISTA PILSERSVPK RVKLGLAMMI TFAIAPSLPA 70 80 90 100 110 120 NDVPVFSFFA LWLAVQQILI GIALGFTMQF AFAAVRTAGE IIGLQMGLSF ATFVDPGSHL 130 140 150 160 170 180 NMPVLARIMD MLALLLFLTF NGHLWLISLL VDTFHTLPIG SEPLNSNAFL APTKAGSLIF 190 200 210 220 230 240 LNGLMLALPL ITLLLTLNLA LGLLNRMAPQ LSIFVIGFPL TLTVGISLMA ALMPLIAPFC 250 260 EHLFSEIFNL LADIISELPL I

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157." Jin Q., Yuan Z., Xu J., Wang Y., Shen Y., Lu W., Wang J., Liu H., Yang J., Yang F., Zhang X., Zhang J., Yang G., Wu H., Qu D., Dong J., Sun L., Xue Y. , Zhao A., Gao Y., Zhu J., Kan B., Ding K., Chen S., Cheng H., Yao Z., He B., Chen R., Ma D., Qiang B., Wen Y., Hou Y., Yu J. Nucleic Acids Res. 30:4432-4441(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 301 EMBL AAN43542.2 and 301 / Serotype 2a.
[2]	"Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T." Wei J., Goldberg M.B., Burland V., Venkatesan M.M., Deng W., Fournier G., Mayhew G.F., Plunkett G. III, Rose D.J., Darling A., Mau B., Perna N.T., Payne S.M., Runyen-Janecky L.J., Zhou S., Schwartz D.C., Blattner F.R. Infect. Immun. 71:2775-2786(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 2457T EMBL AAP17368.1 and ATCC 700930 / 2457T / Serotype 2a.
[3]	Jin Q., Shen Y., Wang J.H., Liu H., Yang J., Yang F., Zhang X.B., Zhang J.Y., Yang G.W., Wu H.T., Dong J., Sun L.L., Xue Y., Zhao A.L., Gao Y.S., Zhu J.P., Chen S.X., Yao Z.J. , Wang Y., Lu W.C., Qiang B.Q., Wen Y.M., Hou Y.D. Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: 301 EMBL AAN43542.2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE005674 Genomic DNA. Translation: AAN43542.2. AE014073 Genomic DNA. Translation: AAP17368.1.
RefSeq	NP_707835.2. NC_004337.2. NP_837559.1. NC_004741.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	198214.SF1995.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAN43542; AAN43542; SF1995. AAP17368; AAP17368; S2089.
GeneID	1025189. 1078403.
KEGG	sfl:SF1995. sfx:S2089.
PATRIC	18705676. VBIShiFle31049_2326.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000253545.
KO	K02421.
ProtClustDB	PRK05701.
Family and domain databases
InterPro	IPR006303. FliR. IPR002010. T3SS_IM_R. [Graphical view]
Pfam	PF01311. Bac_export_1. 1 hit. [Graphical view]
PRINTS	PR00953. TYPE3IMRPROT.
TIGRFAMs	TIGR01400. fliR. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q83R27_SHIFL

Accession

Primary (citable) accession number: Q83R27
Secondary accession number(s): Q7UAA3

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	February 1, 2005
Last modified:	May 1, 2013
This is version 66 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)