Q83LR6 (Q83LR6_SHIFL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-binding component of serine protease EMBL AAN42475.2

Gene names

Name:	clpA EMBL AAN42475.2
Ordered Locus Names:	SF0842

Organism

Shigella flexneri [Complete proteome] [HAMAP]

Taxonomic identifier

623 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Shigella

Protein attributes

Sequence length	758 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the clpA/clpB family. RuleBase RU004432

Ontologies

Keywords
Domain	Repeat SAAS SAAS001270
Ligand	ATP-binding RuleBase RU004433 EMBL AAN42475.2 Nucleotide-binding
Molecular function	Chaperone RuleBase RU004433 SAAS SAAS001270 Hydrolase Protease EMBL AAN42475.2
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	proteolysis Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATP-dependent peptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q83LR6 [UniParc]. Last modified July 5, 2005. Version 4. Checksum: 173FD7F10D04E813	FASTA	758	84,191
	10 20 30 40 50 60 MLNQELELSL NMAFARAREH RHEFMTVEHL LLALLSNPSA REALEACSVD LVALRQELEA 70 80 90 100 110 120 FIEQTTPVLP ASEEERDTQP TLSFQRVLQR AVFHVQSSGR NEVTGANVLV AIFSEQESQA 130 140 150 160 170 180 AYLLRKHEVS RLDVVNFISH GTRKDEPTQS SDPGSQPNSE EQAGGEERME NFTTNLNQLA 190 200 210 220 230 240 RVGGIDPLIG REKELERAIQ VLCRRRKNNP LLVGESGVGK TAIAEGLAWR IVQGDVPEVM 250 260 270 280 290 300 ADCTIYSLDI GSLLAGTKYR GDFEKRFKAL LKQLEQDTNS ILFIDEIHTI IGAGAASGGQ 310 320 330 340 350 360 VDAANLIKPL LSSGKIRVIG STTYQEFSNI FEKDRALARR SQKIDITEPS IEETVQIING 370 380 390 400 410 420 LKPKYEAHHD VRYTAKAVRA AVELAVKYIN DRHLPDKAID VIDEAGARAR LMPVSKRKKT 430 440 450 460 470 480 VNVADIESVV ARIARIPEKS VSQSDRDTLK KLSDRLKMLV FGQDKAIEAL TEAIKMARAG 490 500 510 520 530 540 LGHEHKPVGS FLFAGPTGVG KTEVTVQLSK ALGIELLRFD MSEYMERHTV SRLIGAPPGY 550 560 570 580 590 600 VGFDQGGLLT DAVIKHPHAV LLLDEIEKAH PDVFNILLQV MDNGTLTDNN GRKADFRNVV 610 620 630 640 650 660 LVMTTNAGVR ETERKSIGLI HQDNSTDAME EIKKIFTPEF RNRLDNIIWF DHLSTDVIHQ 670 680 690 700 710 720 VVDKFIVELQ VQLDQKGVSL EVSQEARNWL AEKGYDRAMG ARPMARVIQD NLKKPLANEL 730 740 750 LFGSLVDGGQ VTVALDKEKN ELTYGFQSAQ KHKAEAAH

References

[1]

"Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157." Jin Q., Yuan Z., Xu J., Wang Y., Shen Y., Lu W., Wang J., Liu H., Yang J., Yang F., Zhang X., Zhang J., Yang G., Wu H., Qu D., Dong J., Sun L., Xue Y. , Zhao A., Gao Y., Zhu J., Kan B., Ding K., Chen S., Cheng H., Yao Z., He B., Chen R., Ma D., Qiang B., Wen Y., Hou Y., Yu J. Nucleic Acids Res. 30:4432-4441(2002) [PubMed: 12384590] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 301 / Serotype 2a.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE005674 Genomic DNA. Translation: AAN42475.2.
RefSeq	NP_706768.2. NC_004337.2.
3D structure databases
ProteinModelPortal	Q83LR6.
SMR	Q83LR6. Positions 1-755.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000093101; EBESCP00000089737; EBESCG00000092145.
GeneID	1023790.
GenomeReviews	Gene locus SF0842 in contig AE005674_GR.
KEGG	sfl:SF0842.
PATRIC	18713492. VBIShiFle86970_0971.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000008751.
HOGENOM	HBG413133.
ProtClustDB	PRK11034.
Enzyme and pathway databases
BioCyc	SFLE198214:AAN42475.1-MONOMER.
Family and domain databases
InterPro	IPR003593. ATPase_AAA+_core. IPR013093. ATPase_AAA-2. IPR003959. ATPase_AAA_core. IPR018368. Chaperonin_ClpA/B_CS. IPR001270. Chaprnin_ClpA/B. IPR019489. Clp_ATPase_C. IPR004176. Clp_N. IPR013461. ClpA. IPR023150. Dbl_Clp-N. [Graphical view]
Gene3D	G3DSA:1.10.1780.10. Dbl_Clp-N. 1 hit.
KO	K03694.
PANTHER	PTHR11638:SF14. PTHR11638:SF14. 1 hit.
Pfam	PF00004. AAA. 1 hit. PF07724. AAA_2. 1 hit. PF02861. Clp_N. 1 hit. PF10431. ClpB_D2-small. 1 hit. [Graphical view]
PRINTS	PR00300. CLPPROTEASEA.
SMART	SM00382. AAA. 2 hits. SM01086. ClpB_D2-small. 1 hit. [Graphical view]
TIGRFAMs	TIGR02639. ClpA. 1 hit.
PROSITE	PS00870. CLPAB_1. 1 hit. PS00871. CLPAB_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q83LR6_SHIFL

Accession

Primary (citable) accession number: Q83LR6

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	July 5, 2005
Last modified:	January 25, 2012
This is version 52 of the entry and version 4 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)