Putative uncharacterized protein - Shigella flexneri

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Q83K87 (Q83K87_SHIFL) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 57. History...

Clusters with 100%, 90%, 50% identity |

Third-party data

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Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info Customize order

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Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL AAN43959.1

Gene names

Ordered Locus Names:

S2589, SF2449.1, SF2450

Organism

Shigella flexneri [Complete proteome] [HAMAP]

Taxonomic identifier

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Shigella

Protein attributes

Sequence length	345 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Ligand	Metal-binding PDB 1YLO Zinc PDB 1YLO
Technical term	3D-structure PDB 1YLO Complete proteome
Gene Ontology (GO)
Molecular function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Sites

Metal binding

1

Zinc 1; via tele nitrogen PDB 1YLO

Metal binding

1

Zinc 1 PDB 1YLO

Metal binding

1

Zinc 2 PDB 1YLO

Metal binding

1

Zinc 2 PDB 1YLO

Metal binding

1

Zinc 1 PDB 1YLO

Metal binding

1

Zinc 2; via tele nitrogen PDB 1YLO

Sequences

Sequence

Length

Mass (Da)

Tools

Q83K87 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 918CA3DECE131AED
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345

37,438

        10         20         30         40         50         60 
MDLSLLKALS EADAIASSEQ EVRQILLEEA ARLQKEVRFD GLGSVLIRLN ESTGPKVMIC 

        70         80         90        100        110        120 
AHMDEVGFMV RSISREGAID VLPVGNVRMA ARQLQPVRIT TREECKIPGL LDGDRQGNDV 

       130        140        150        160        170        180 
SAMRVDIGAR TYDEVMQAGI RPGDRVTFDT TFQVLPHQRV MGKAFDDRLS CYLLVTLLRE 

       190        200        210        220        230        240 
LHDAELPAEV WLVASSSEEV GLRGGQTATR AVSPDVAIVL DTACWAKNFD YGAANHRQIG 

       250        260        270        280        290        300 
NGPMLVLSDK SLIAPPKLTA WIETVAAEIG VPLQADMFSN GGTDGGAVHL TGTGVPTLVM 

       310        320        330        340 
GPATRHGHCA ASIADCRDIL QMEQLLSALI QRLTRETVVQ LTDFR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157." Jin Q., Yuan Z., Xu J., Wang Y., Shen Y., Lu W., Wang J., Liu H., Yang J., Yang F., Zhang X., Zhang J., Yang G., Wu H., Qu D., Dong J., Sun L., Xue Y. Yu J. Nucleic Acids Res. 30:4432-4441(2002) [PubMed: 12384590] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 301 / Serotype 2a.
[2]	"Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T." Wei J., Goldberg M.B., Burland V., Venkatesan M.M., Deng W., Fournier G., Mayhew G.F., Plunkett G. III, Rose D.J., Darling A., Mau B., Perna N.T., Payne S.M., Runyen-Janecky L.J., Zhou S., Schwartz D.C., Blattner F.R. Infect. Immun. 71:2775-2786(2003) [PubMed: 12704152] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700930 / 2457T / Serotype 2a.
[3]	"Crystal Structure of hypothetical protein from Shigella flexneri 2a." Midwest Center for Structural Genomics (MCSG) Nocek B.P., Binkowski A., Li H., Joachimiak A. Submitted (JAN-2005) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.15 ANGSTROMS) IN COMPLEX WITH ZINC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE005674 Genomic DNA. Translation: AAN43959.1.
AE014073 Genomic DNA. Translation: AAP17770.1.

RefSeq

NP_708252.1. NC_004337.2.
NP_837960.1. NC_004741.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1YLO	X-ray	2.15	A/B/C/D/E/F	1-345	[»]

ProteinModelPortal

SMR

Q83K87. Positions 1-345.

ModBase

Protein family/group databases

MEROPS

Protocols and materials databases

StructuralBiologyKnowledgebase

Genome annotation databases

EnsemblBacteria

EBESCT00000085249; EBESCP00000082071; EBESCG00000084295.
EBESCT00000090484; EBESCP00000087120; EBESCG00000089528.

GeneID

1027213.
1078865.

GenomeReviews

Gene locus SF2449.1 in contig AE005674_GR.
Gene locus S2589 in contig AE014073_GR.

KEGG

sfl:SF2450.
sfx:S2589.

PATRIC

18706784. VBIShiFle31049_2866.

Organism-specific databases

CMR

Phylogenomic databases

GeneTree

EBGT00050000008972.

HOGENOM

OMA

ProtClustDB

Enzyme and pathway databases

BioCyc

SFLE198214:AAN43959.1-MONOMER.

Family and domain databases

InterPro

IPR008007. Peptidase_M42.
IPR023367. Peptidase_M42_dom2.
[Graphical view]

Gene3D

G3DSA:2.40.30.40. G3DSA:2.40.30.40. 1 hit.

Pfam

PF05343. Peptidase_M42. 1 hit.
[Graphical view]

PIRSF

PIRSF001123. PepA_GA. 1 hit.

ProtoNet

Entry information

Entry name

Q83K87_SHIFL

Accession

Primary (citable) accession number: Q83K87
Secondary accession number(s): Q7C0L3

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	December 14, 2011
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

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Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info