Q83IB6 (RL28_TROW8) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L28

Gene names

Name:	rpmB
Ordered Locus Names:	TW125

Organism

Tropheryma whipplei (strain TW08/27) (Whipple's bacillus) [Complete proteome] [HAMAP]

Taxonomic identifier

218496 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Tropheryma

Protein attributes

Sequence length	78 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L28P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 78	78	50S ribosomal protein L28 HAMAP MF_00373		PRO_0000178581

Sequences

	Sequence		Length	Mass (Da)
	Q83IB6 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 449CC3AC8FF0B97F	FASTA	78	8,769
	10 20 30 40 50 60 MSSVCQVTGA SPGFGYAVSH SHRRTKRRFD PNVRRRTFYV ATLGRRVTLN VSVKGLRLID 70 KRGIDAVVRD LIKKGVKL

References

[1]

"Sequencing and analysis of the genome of the Whipple's disease bacterium Tropheryma whipplei." Bentley S.D., Maiwald M., Murphy L.D., Pallen M.J., Yeats C.A., Dover L.G., Norbertczak H.T., Besra G.S., Quail M.A., Harris D.E., von Herbay A., Goble A., Rutter S., Squares R., Squares S., Barrell B.G., Parkhill J., Relman D.A. Lancet 361:637-644(2003) [PubMed: 12606174] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TW08/27.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX251410 Genomic DNA. Translation: CAD66805.1.
RefSeq	NP_789068.1. NC_004551.1.
3D structure databases
ProteinModelPortal	Q83IB6.
ModBase	Search...
Protein-protein interaction databases
STRING	Q83IB6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1064420.
GenomeReviews	Gene locus TW125 in contig BX072543_GR.
KEGG	tws:TW125.
PATRIC	23998596. VBITroWhi42739_0143.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0227.
HOGENOM	HBG597003.
OMA	MAAVCQV.
PhylomeDB	Q83IB6.
ProtClustDB	PRK00359.
Enzyme and pathway databases
BioCyc	TWHI218496:TW0113-MONOMER.
Family and domain databases
HAMAP	MF_00373. Ribosomal_L28. [Tree]
InterPro	IPR001383. Ribosomal_L28. [Graphical view]
KO	K02902.
Pfam	PF00830. Ribosomal_L28. 1 hit. [Graphical view]
TIGRFAMs	TIGR00009. L28. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RL28_TROW8

Accession

Primary (citable) accession number: Q83IB6

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 7, 2005
Last sequence update:	June 1, 2003
Last modified:	January 25, 2012
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program