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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

gabT

Organism
Tropheryma whipplei (strain TW08/27) (Whipple's bacillus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported (EC:2.6.1.19Imported)
Gene namesi
Name:gabTImported
Ordered Locus Names:TW652Imported
OrganismiTropheryma whipplei (strain TW08/27) (Whipple's bacillus)Imported
Taxonomic identifieri218496 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeTropheryma
ProteomesiUP000001413: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi218496.TW652.

Structurei

3D structure databases

ProteinModelPortaliQ83HF1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK07250.
OMAiLPEKLCT.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q83HF1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSKIKLVTAI PGPESERLHR IRQATVARGV SSTFPIYIKE SHGSILIDED
60 70 80 90 100
GNHLIDMGCG IGVTTLGHSH PAVVDAARAQ INSVWHTLFS ITPYESYVEV
110 120 130 140 150
CKLLAKNTPG DFPKKSLLLN SGAEAVENAV KISRAYTGRP TVAVLDRSFH
160 170 180 190 200
GRTNLTSSMT YRGSLYSSDF GPTASNIVSA PNSYPLHDRL SGKEAAARTI
210 220 230 240 250
SYLETRVAAR NIACLFYEPI QGEGGVIVPA DGFLPALQDW CRENDIVFVA
260 270 280 290 300
DEIQSGFGRT GCFFASETDG LEPDIVCSAK GIANGLPLSA VTGRSDIVDA
310 320 330 340 350
ARPGTLGGTF TGNHVSCAAA LEVFEQYKDN APLDSASRLG DILKELLLNL
360 370 380 390 400
QSKHPQIAEV RGRGAMFGAE FSGNHAGEMV SRVITRAAEL GVIFLSSGVE
410 420 430
GNVVRFLPNV FMDKETIEEA IGVLDSAISS VV
Length:432
Mass (Da):46,115
Last modified:June 1, 2003 - v1
Checksum:i93A112C35AB2BA36
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX251412 Genomic DNA. Translation: CAD67314.1.
RefSeqiNP_789576.1. NC_004551.1.

Genome annotation databases

EnsemblBacteriaiCAD67314; CAD67314; TW652.
GeneIDi1064855.
KEGGitws:TW652.
PATRICi23999977. VBITroWhi42739_0799.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX251412 Genomic DNA. Translation: CAD67314.1.
RefSeqiNP_789576.1. NC_004551.1.

3D structure databases

ProteinModelPortaliQ83HF1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi218496.TW652.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAD67314; CAD67314; TW652.
GeneIDi1064855.
KEGGitws:TW652.
PATRICi23999977. VBITroWhi42739_0799.

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK07250.
OMAiLPEKLCT.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TW08/27Imported.

Entry informationi

Entry nameiQ83HF1_TROW8
AccessioniPrimary (citable) accession number: Q83HF1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: February 4, 2015
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.