Q83HF1 (Q83HF1_TROW8) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-aminobutyrate aminotransferase EMBL CAD67314.1
EC=2.6.1.19 EMBL CAD67314.1

Gene names

Name:	gabT EMBL CAD67314.1
Ordered Locus Names:	TW652

Organism

Tropheryma whipplei (strain TW08/27) (Whipple's bacillus) [Complete proteome] [HAMAP] EMBL CAD67314.1

Taxonomic identifier

218496 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › unclassified Micrococcineae › Tropheryma › Tropheryma whipplei

Protein attributes

Sequence length	432 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL CAD67314.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q83HF1 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 93A112C35AB2BA36	FASTA	432	46,115
	10 20 30 40 50 60 MSKIKLVTAI PGPESERLHR IRQATVARGV SSTFPIYIKE SHGSILIDED GNHLIDMGCG 70 80 90 100 110 120 IGVTTLGHSH PAVVDAARAQ INSVWHTLFS ITPYESYVEV CKLLAKNTPG DFPKKSLLLN 130 140 150 160 170 180 SGAEAVENAV KISRAYTGRP TVAVLDRSFH GRTNLTSSMT YRGSLYSSDF GPTASNIVSA 190 200 210 220 230 240 PNSYPLHDRL SGKEAAARTI SYLETRVAAR NIACLFYEPI QGEGGVIVPA DGFLPALQDW 250 260 270 280 290 300 CRENDIVFVA DEIQSGFGRT GCFFASETDG LEPDIVCSAK GIANGLPLSA VTGRSDIVDA 310 320 330 340 350 360 ARPGTLGGTF TGNHVSCAAA LEVFEQYKDN APLDSASRLG DILKELLLNL QSKHPQIAEV 370 380 390 400 410 420 RGRGAMFGAE FSGNHAGEMV SRVITRAAEL GVIFLSSGVE GNVVRFLPNV FMDKETIEEA 430 IGVLDSAISS VV

References

[1]

"Sequencing and analysis of the genome of the Whipple's disease bacterium Tropheryma whipplei." Bentley S.D., Maiwald M., Murphy L.D., Pallen M.J., Yeats C.A., Dover L.G., Norbertczak H.T., Besra G.S., Quail M.A., Harris D.E., von Herbay A., Goble A., Rutter S., Squares R., Squares S., Barrell B.G., Parkhill J., Relman D.A. Lancet 361:637-644(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TW08/27.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX251412 Genomic DNA. Translation: CAD67314.1.
RefSeq	NP_789576.1. NC_004551.1.
3D structure databases
HSSP	HSSP built from PDB template 1QJ3 based on UniProtKB P12995.
ProteinModelPortal	Q83HF1.
ModBase	Search...
Protein-protein interaction databases
STRING	218496.TW652.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAD67314; CAD67314; TW652.
GeneID	1064855.
KEGG	tws:TW652.
PATRIC	23999977. VBITroWhi42739_0799.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0160.
HOGENOM	HOG000020206.
KO	K07250.
OMA	ITGRAQV.
ProtClustDB	CLSK230176.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q83HF1_TROW8

Accession

Primary (citable) accession number: Q83HF1

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	May 1, 2013
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)