Reviewed, UniProtKB/Swiss-Prot Q83ES4 (RL3_COXBU)

Names and origin

Protein names

Recommended name:
    50S ribosomal protein L3

Gene names

Name:	rplC
Ordered Locus Names:	CBU_0238

Organism

Coxiella burnetii [Complete proteome] [HAMAP]

Taxonomic identifier

777 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Legionellales › Coxiellaceae › Coxiella

Protein attributes

Sequence length	217 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit By similarity.
Subunit structure	Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19 By similarity.
Sequence similarities	Belongs to the ribosomal protein L3P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 217	217	50S ribosomal protein L3 HAMAP MF_01325		PRO_0000077096

Sequences

	Sequence		Length	Mass (Da)
	Q83ES4-1 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 89C4813CA125DD9D	FASTA	217	23,508
	10 20 30 40 50 60 MSIGLIGRKC GMTRIFTETG SSIPVTVVEV ILNRITQVKT VETDGYRAFQ VAYGKKSSAR 70 80 90 100 110 120 VNKPLAGHYS KAAVEAGNAL REFRLGNEEL TEAKAGDELK VDIFKEGQVV DVRGLTRGKG 130 140 150 160 170 180 FAGTVKRHNF RTQDATHGNS LSHRAPGSIG QCQTPGRVWK GKKMAGQLGN VYCTVQSQEI 190 200 210 IKVDVERNLL LIKGALPGAP GGEVIITQSS KKRKEDK

References

[1]

"Complete genome sequence of the Q-fever pathogen, Coxiella burnetii." Seshadri R., Paulsen I.T., Eisen J.A., Read T.D., Nelson K.E., Nelson W.C., Ward N.L., Tettelin H., Davidsen T.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Brinkac L.M., Madupu R., Dodson R.J., Khouri H.M., Lee K.H., Carty H.A. , Scanlan D., Heinzen R.A., Thompson H.A., Samuel J.E., Fraser C.M., Heidelberg J.F. Proc. Natl. Acad. Sci. U.S.A. 100:5455-5460(2003) [PubMed: 12704232] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Nine Mile phase I / RSA 493.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE016828 Genomic DNA. Translation: AAO89796.1.
RefSeq	NP_819282.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	1208119.
GenomeReviews	Gene locus CBU_0238 in contig AE016828_GR.
KEGG	cbu:CBU_0238.
NMPDR	fig|227377.1.peg.226.
TIGR	CBU_0238.
Phylogenomic databases
HOGENOM	Q83ES4.
OMA	AEFRVSE
Enzyme and pathway databases
BioCyc	CBUR227377:CBU_0238-MON.
Family and domain databases
HAMAP	MF_01325. [Tree]
InterPro	IPR000597. Ribosomal_L3. IPR019927. Ribosomal_L3_bac/org-type. IPR019926. Ribosomal_L3_CS. IPR009000. Transl_elong_init/rib_B-barrel. [Graphical view]
Pfam	PF00297. Ribosomal_L3. 1 hit. [Graphical view]
TIGRFAMs	TIGR03625. L3_bact. 1 hit.
PROSITE	PS00474. RIBOSOMAL_L3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL3_COXBU

Accession

Primary (citable) accession number: Q83ES4

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 16, 2004
Last sequence update:	June 1, 2003
Last modified:	November 24, 2009
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)