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Q83ES4

- RL3_COXBU

UniProt

Q83ES4 - RL3_COXBU

Protein

50S ribosomal protein L3

Gene

rplC

Organism
Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 61 (01 Oct 2014)
      Sequence version 1 (01 Jun 2003)
      Previous versions | rss
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    Functioni

    One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciCBUR227377:GJ7S-244-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L3UniRule annotation
    Gene namesi
    Name:rplCUniRule annotation
    Ordered Locus Names:CBU_0238
    OrganismiCoxiella burnetii (strain RSA 493 / Nine Mile phase I)
    Taxonomic identifieri227377 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella
    ProteomesiUP000002671: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 21721750S ribosomal protein L3PRO_0000077096Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei153 – 1531N5-methylglutamineUniRule annotation

    Post-translational modificationi

    Methylated by PrmB.UniRule annotation

    Keywords - PTMi

    Methylation

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19.UniRule annotation

    Protein-protein interaction databases

    STRINGi227377.CBU_0238.

    Structurei

    3D structure databases

    ProteinModelPortaliQ83ES4.
    SMRiQ83ES4. Positions 3-211.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L3P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0087.
    HOGENOMiHOG000100368.
    KOiK02906.
    OMAiSMQDATH.
    OrthoDBiEOG6WDSMH.

    Family and domain databases

    HAMAPiMF_01325_B. Ribosomal_L3_B.
    InterProiIPR000597. Ribosomal_L3.
    IPR019927. Ribosomal_L3_bac/org-type.
    IPR019926. Ribosomal_L3_CS.
    IPR009000. Transl_B-barrel.
    [Graphical view]
    PANTHERiPTHR11229. PTHR11229. 1 hit.
    PfamiPF00297. Ribosomal_L3. 1 hit.
    [Graphical view]
    SUPFAMiSSF50447. SSF50447. 1 hit.
    TIGRFAMsiTIGR03625. L3_bact. 1 hit.
    PROSITEiPS00474. RIBOSOMAL_L3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q83ES4-1 [UniParc]FASTAAdd to Basket

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    MSIGLIGRKC GMTRIFTETG SSIPVTVVEV ILNRITQVKT VETDGYRAFQ    50
    VAYGKKSSAR VNKPLAGHYS KAAVEAGNAL REFRLGNEEL TEAKAGDELK 100
    VDIFKEGQVV DVRGLTRGKG FAGTVKRHNF RTQDATHGNS LSHRAPGSIG 150
    QCQTPGRVWK GKKMAGQLGN VYCTVQSQEI IKVDVERNLL LIKGALPGAP 200
    GGEVIITQSS KKRKEDK 217
    Length:217
    Mass (Da):23,508
    Last modified:June 1, 2003 - v1
    Checksum:i89C4813CA125DD9D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016828 Genomic DNA. Translation: AAO89796.1.
    RefSeqiNP_819282.1. NC_002971.3.

    Genome annotation databases

    EnsemblBacteriaiAAO89796; AAO89796; CBU_0238.
    GeneIDi1208119.
    KEGGicbu:CBU_0238.
    PATRICi17929169. VBICoxBur82552_0233.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016828 Genomic DNA. Translation: AAO89796.1 .
    RefSeqi NP_819282.1. NC_002971.3.

    3D structure databases

    ProteinModelPortali Q83ES4.
    SMRi Q83ES4. Positions 3-211.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 227377.CBU_0238.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAO89796 ; AAO89796 ; CBU_0238 .
    GeneIDi 1208119.
    KEGGi cbu:CBU_0238.
    PATRICi 17929169. VBICoxBur82552_0233.

    Phylogenomic databases

    eggNOGi COG0087.
    HOGENOMi HOG000100368.
    KOi K02906.
    OMAi SMQDATH.
    OrthoDBi EOG6WDSMH.

    Enzyme and pathway databases

    BioCyci CBUR227377:GJ7S-244-MONOMER.

    Family and domain databases

    HAMAPi MF_01325_B. Ribosomal_L3_B.
    InterProi IPR000597. Ribosomal_L3.
    IPR019927. Ribosomal_L3_bac/org-type.
    IPR019926. Ribosomal_L3_CS.
    IPR009000. Transl_B-barrel.
    [Graphical view ]
    PANTHERi PTHR11229. PTHR11229. 1 hit.
    Pfami PF00297. Ribosomal_L3. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50447. SSF50447. 1 hit.
    TIGRFAMsi TIGR03625. L3_bact. 1 hit.
    PROSITEi PS00474. RIBOSOMAL_L3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RSA 493 / Nine Mile phase I.

    Entry informationi

    Entry nameiRL3_COXBU
    AccessioniPrimary (citable) accession number: Q83ES4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 16, 2004
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 61 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Coxiella burnetii
      Coxiella burnetii (strain RSA 493): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3