Reviewed, UniProtKB/Swiss-Prot Q83ER9 (RL16_COXBU)

Names and origin

Protein names

Recommended name:
    50S ribosomal protein L16

Gene names

Name:	rplP
Ordered Locus Names:	CBU_0245

Organism

Coxiella burnetii [Complete proteome] [HAMAP]

Taxonomic identifier

777 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Legionellales › Coxiellaceae › Coxiella

Protein attributes

Sequence length	137 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs By similarity.
Subunit structure	Part of the 50S ribosomal subunit. HAMAP MF_01342
Sequence similarities	Belongs to the ribosomal protein L16P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding tRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro tRNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 137	137	50S ribosomal protein L16 HAMAP MF_01342		PRO_0000062089

Sequences

	Sequence		Length	Mass (Da)
	Q83ER9-1 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 8B11C2D9BB1AED05	FASTA	137	15,499
	10 20 30 40 50 60 MLQPSNRKYR KDFKGRNRGV ASRGNRVSFG EFGLKATECA RITARQLEAA RRTIARHIKR 70 80 90 100 110 120 GGKITIRIFP DKPITKKPLE VRQGKGKGSV EYWVALVQPG RMIFEIEGVD EALAREAFSR 130 AAAKLPLKCL FVKRTVM

References

[1]

"Complete genome sequence of the Q-fever pathogen, Coxiella burnetii." Seshadri R., Paulsen I.T., Eisen J.A., Read T.D., Nelson K.E., Nelson W.C., Ward N.L., Tettelin H., Davidsen T.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Brinkac L.M., Madupu R., Dodson R.J., Khouri H.M., Lee K.H., Carty H.A. , Scanlan D., Heinzen R.A., Thompson H.A., Samuel J.E., Fraser C.M., Heidelberg J.F. Proc. Natl. Acad. Sci. U.S.A. 100:5455-5460(2003) [PubMed: 12704232] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Nine Mile phase I / RSA 493.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE016828 Genomic DNA. Translation: AAO89803.1.
RefSeq	NP_819289.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	1208126.
GenomeReviews	Gene locus CBU_0245 in contig AE016828_GR.
KEGG	cbu:CBU_0245.
NMPDR	fig|227377.1.peg.233.
TIGR	CBU_0245.
Phylogenomic databases
HOGENOM	Q83ER9.
OMA	KGSPEFW
Enzyme and pathway databases
BioCyc	CBUR227377:CBU_0245-MON.
Family and domain databases
HAMAP	MF_01342. [Tree]
InterPro	IPR016180. Ribosomal_L10e/L16. IPR000114. Ribosomal_L16. [Graphical view]
PANTHER	PTHR12220. Ribosomal_L16. 1 hit.
Pfam	PF00252. Ribosomal_L16. 1 hit. [Graphical view]
PRINTS	PR00060. RIBOSOMALL16.
TIGRFAMs	TIGR01164. rplP_bact. 1 hit.
PROSITE	PS00586. RIBOSOMAL_L16_1. False negative. PS00701. RIBOSOMAL_L16_2. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL16_COXBU

Accession

Primary (citable) accession number: Q83ER9

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 10, 2006
Last sequence update:	June 1, 2003
Last modified:	November 3, 2009
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)