Reviewed,
UniProtKB/Swiss-Prot Q83EQ4 (RS11_COXBU)
Last modified
November 24, 2009.
Version 37.
History...
Clusters with 100%,
90%,
50% identity |
Documents (3) |
Third-party data |
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Names and origin
| Protein names | Recommended name: 30S ribosomal protein S11 | ||||
| Gene names |
| ||||
| Organism | Coxiella burnetii [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 777 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Legionellales › Coxiellaceae › Coxiella |
Protein attributes
| Sequence length | 123 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Function | Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome By similarity. |
| Subunit structure | Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3 By similarity. |
| Sequence similarities | Belongs to the ribosomal protein S11P family. |
Ontologies
| Keywords | |
|---|---|
| Ligand | RNA-binding rRNA-binding |
| Molecular function | Ribonucleoprotein Ribosomal protein |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | translation Inferred from electronic annotation. Source: HAMAP |
| Cellular component | ribosome Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosomeInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 123 | 123 | 30S ribosomal protein S11 HAMAP MF_01310 | PRO_0000123140 | |||
Sequences
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References
| [1] | "Complete genome sequence of the Q-fever pathogen, Coxiella burnetii." Seshadri R., Paulsen I.T., Eisen J.A., Read T.D., Nelson K.E., Nelson W.C., Ward N.L., Tettelin H., Davidsen T.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Brinkac L.M., Madupu R., Dodson R.J., Khouri H.M., Lee K.H., Carty H.A. Heidelberg J.F.Proc. Natl. Acad. Sci. U.S.A. 100:5455-5460(2003) [PubMed: 12704232] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Nine Mile phase I / RSA 493. |
Cross-references
Sequence databases | |
|---|---|
| AE016828 Genomic DNA. Translation: AAO89819.1. | |
| RefSeq | NP_819305.1. |
3D structure databases | |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 1208142. |
| GenomeReviews | Gene locus CBU_0261 in contig AE016828_GR. |
| KEGG | cbu:CBU_0261. |
| NMPDR | fig|227377.1.peg.249. |
| TIGR | CBU_0261. |
Phylogenomic databases | |
| HOGENOM | Q83EQ4. |
| OMA | ITLIRDV |
Enzyme and pathway databases | |
| BioCyc | CBUR227377:CBU_0261-MON. |
Family and domain databases | |
| HAMAP | MF_01310. [Tree] |
| InterPro | IPR001971. Ribosomal_S11. IPR019981. Ribosomal_S11_bac-type. IPR018102. Ribosomal_S11_CS. [Graphical view] |
| Gene3D | G3DSA:3.30.420.80. Ribosomal_S11. 1 hit. |
| PANTHER | PTHR11759. Ribosomal_S11. 1 hit. |
| Pfam | PF00411. Ribosomal_S11. 1 hit. [Graphical view] |
| PIRSF | PIRSF002131. Ribosomal_S11. 1 hit. |
| TIGRFAMs | TIGR03632. Bact_S11. 1 hit. |
| PROSITE | PS00054. RIBOSOMAL_S11. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | RS11_COXBU | ||||||||
| Accession | Primary (citable) accession number: Q83EQ4 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| Coxiella burnetii Coxiella burnetii (strain RSA 493): entries and gene names |
| Ribosomal proteins Ribosomal proteins families and list of entries |
| SIMILARITY comments Index of protein domains and families |

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