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Q83EE0

- RL21_COXBU

UniProt

Q83EE0 - RL21_COXBU

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Protein

50S ribosomal protein L21

Gene
rplU, CBU_0385
Organism
Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

This protein binds to 23S rRNA in the presence of protein L20 By similarity.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciCBUR227377:GJ7S-388-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L21
Gene namesi
Name:rplU
Ordered Locus Names:CBU_0385
OrganismiCoxiella burnetii (strain RSA 493 / Nine Mile phase I)
Taxonomic identifieri227377 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella
ProteomesiUP000002671: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 11511550S ribosomal protein L21UniRule annotationPRO_0000269308Add
BLAST

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Contacts protein L20 By similarity.

Protein-protein interaction databases

STRINGi227377.CBU_0385.

Structurei

3D structure databases

ProteinModelPortaliQ83EE0.
SMRiQ83EE0. Positions 1-102.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0261.
HOGENOMiHOG000036265.
KOiK02888.
OMAiQGRGDKV.
OrthoDBiEOG6TJ84X.

Family and domain databases

HAMAPiMF_01363. Ribosomal_L21.
InterProiIPR028909. L21p-like.
IPR001787. Ribosomal_L21.
IPR018258. Ribosomal_L21_CS.
[Graphical view]
PfamiPF00829. Ribosomal_L21p. 1 hit.
[Graphical view]
SUPFAMiSSF141091. SSF141091. 1 hit.
TIGRFAMsiTIGR00061. L21. 1 hit.
PROSITEiPS01169. RIBOSOMAL_L21. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q83EE0-1 [UniParc]FASTAAdd to Basket

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MYAIIKTGGK QYRVTEGQML KVEKLAQDVG QSVKFDDVLM VAAGDELHIG    50
TPSVKDAAVT AEVVDQGRQA KIEIIKFKRR KHHMKRQGHR QDFTAVKITE 100
IALGKAKKEV KTDGA 115
Length:115
Mass (Da):12,760
Last modified:December 12, 2006 - v2
Checksum:iD3AF66CD87731167
GO

Sequence cautioni

The sequence AAO89938.2 differs from that shown. Reason: Erroneous initiation.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE016828 Genomic DNA. Translation: AAO89938.2. Different initiation.
RefSeqiNP_819424.2. NC_002971.3.

Genome annotation databases

EnsemblBacteriaiAAO89938; AAO89938; CBU_0385.
GeneIDi1208268.
KEGGicbu:CBU_0385.
PATRICi17929467. VBICoxBur82552_0380.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE016828 Genomic DNA. Translation: AAO89938.2 . Different initiation.
RefSeqi NP_819424.2. NC_002971.3.

3D structure databases

ProteinModelPortali Q83EE0.
SMRi Q83EE0. Positions 1-102.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 227377.CBU_0385.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAO89938 ; AAO89938 ; CBU_0385 .
GeneIDi 1208268.
KEGGi cbu:CBU_0385.
PATRICi 17929467. VBICoxBur82552_0380.

Phylogenomic databases

eggNOGi COG0261.
HOGENOMi HOG000036265.
KOi K02888.
OMAi QGRGDKV.
OrthoDBi EOG6TJ84X.

Enzyme and pathway databases

BioCyci CBUR227377:GJ7S-388-MONOMER.

Family and domain databases

HAMAPi MF_01363. Ribosomal_L21.
InterProi IPR028909. L21p-like.
IPR001787. Ribosomal_L21.
IPR018258. Ribosomal_L21_CS.
[Graphical view ]
Pfami PF00829. Ribosomal_L21p. 1 hit.
[Graphical view ]
SUPFAMi SSF141091. SSF141091. 1 hit.
TIGRFAMsi TIGR00061. L21. 1 hit.
PROSITEi PS01169. RIBOSOMAL_L21. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RSA 493 / Nine Mile phase I.

Entry informationi

Entry nameiRL21_COXBU
AccessioniPrimary (citable) accession number: Q83EE0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: December 12, 2006
Last modified: May 14, 2014
This is version 67 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Coxiella burnetii
    Coxiella burnetii (strain RSA 493): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi