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Q83EE0

- RL21_COXBU

UniProt

Q83EE0 - RL21_COXBU

Protein

50S ribosomal protein L21

Gene

rplU

Organism
Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    This protein binds to 23S rRNA in the presence of protein L20.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciCBUR227377:GJ7S-388-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L21UniRule annotation
    Gene namesi
    Name:rplUUniRule annotation
    Ordered Locus Names:CBU_0385
    OrganismiCoxiella burnetii (strain RSA 493 / Nine Mile phase I)
    Taxonomic identifieri227377 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella
    ProteomesiUP000002671: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 11511550S ribosomal protein L21PRO_0000269308Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit. Contacts protein L20.UniRule annotation

    Protein-protein interaction databases

    STRINGi227377.CBU_0385.

    Structurei

    3D structure databases

    ProteinModelPortaliQ83EE0.
    SMRiQ83EE0. Positions 1-102.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L21P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0261.
    HOGENOMiHOG000036265.
    KOiK02888.
    OMAiQGRGDKV.
    OrthoDBiEOG6TJ84X.

    Family and domain databases

    HAMAPiMF_01363. Ribosomal_L21.
    InterProiIPR028909. L21p-like.
    IPR001787. Ribosomal_L21.
    IPR018258. Ribosomal_L21_CS.
    [Graphical view]
    PfamiPF00829. Ribosomal_L21p. 1 hit.
    [Graphical view]
    SUPFAMiSSF141091. SSF141091. 1 hit.
    TIGRFAMsiTIGR00061. L21. 1 hit.
    PROSITEiPS01169. RIBOSOMAL_L21. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q83EE0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MYAIIKTGGK QYRVTEGQML KVEKLAQDVG QSVKFDDVLM VAAGDELHIG    50
    TPSVKDAAVT AEVVDQGRQA KIEIIKFKRR KHHMKRQGHR QDFTAVKITE 100
    IALGKAKKEV KTDGA 115
    Length:115
    Mass (Da):12,760
    Last modified:December 12, 2006 - v2
    Checksum:iD3AF66CD87731167
    GO

    Sequence cautioni

    The sequence AAO89938.2 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016828 Genomic DNA. Translation: AAO89938.2. Different initiation.
    RefSeqiNP_819424.2. NC_002971.3.

    Genome annotation databases

    EnsemblBacteriaiAAO89938; AAO89938; CBU_0385.
    GeneIDi1208268.
    KEGGicbu:CBU_0385.
    PATRICi17929467. VBICoxBur82552_0380.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016828 Genomic DNA. Translation: AAO89938.2 . Different initiation.
    RefSeqi NP_819424.2. NC_002971.3.

    3D structure databases

    ProteinModelPortali Q83EE0.
    SMRi Q83EE0. Positions 1-102.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 227377.CBU_0385.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAO89938 ; AAO89938 ; CBU_0385 .
    GeneIDi 1208268.
    KEGGi cbu:CBU_0385.
    PATRICi 17929467. VBICoxBur82552_0380.

    Phylogenomic databases

    eggNOGi COG0261.
    HOGENOMi HOG000036265.
    KOi K02888.
    OMAi QGRGDKV.
    OrthoDBi EOG6TJ84X.

    Enzyme and pathway databases

    BioCyci CBUR227377:GJ7S-388-MONOMER.

    Family and domain databases

    HAMAPi MF_01363. Ribosomal_L21.
    InterProi IPR028909. L21p-like.
    IPR001787. Ribosomal_L21.
    IPR018258. Ribosomal_L21_CS.
    [Graphical view ]
    Pfami PF00829. Ribosomal_L21p. 1 hit.
    [Graphical view ]
    SUPFAMi SSF141091. SSF141091. 1 hit.
    TIGRFAMsi TIGR00061. L21. 1 hit.
    PROSITEi PS01169. RIBOSOMAL_L21. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RSA 493 / Nine Mile phase I.

    Entry informationi

    Entry nameiRL21_COXBU
    AccessioniPrimary (citable) accession number: Q83EE0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 12, 2006
    Last sequence update: December 12, 2006
    Last modified: October 1, 2014
    This is version 68 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Coxiella burnetii
      Coxiella burnetii (strain RSA 493): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3