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Protein

50S ribosomal protein L27

Gene

rpmA

Organism
Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciCBUR227377:GJ7S-389-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L27UniRule annotation
Gene namesi
Name:rpmAUniRule annotation
Ordered Locus Names:CBU_0386
OrganismiCoxiella burnetii (strain RSA 493 / Nine Mile phase I)
Taxonomic identifieri227377 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella
ProteomesiUP000002671 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 909050S ribosomal protein L27PRO_0000181081Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi227377.CBU_0386.

Structurei

3D structure databases

ProteinModelPortaliQ83ED9.
SMRiQ83ED9. Positions 2-83.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L27P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0211.
HOGENOMiHOG000111610.
KOiK02899.
OMAiKDHTLHA.
OrthoDBiEOG6N94H6.

Family and domain databases

HAMAPiMF_00539. Ribosomal_L27.
InterProiIPR001684. Ribosomal_L27.
IPR018261. Ribosomal_L27_CS.
[Graphical view]
PANTHERiPTHR15893. PTHR15893. 1 hit.
PfamiPF01016. Ribosomal_L27. 1 hit.
[Graphical view]
PRINTSiPR00063. RIBOSOMALL27.
ProDomiPD003114. Ribosomal_L27. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00062. L27. 1 hit.
PROSITEiPS00831. RIBOSOMAL_L27. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q83ED9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAHKKAGGST RNGRDSNPKM LGVKRFGGER VLAGNIIVRQ RGTHYRPGEN
60 70 80 90
MGMGRDHTLY ALIEGKVKFT RKGPKKRNFV SIEPLEESQP
Length:90
Mass (Da):10,048
Last modified:June 1, 2003 - v1
Checksum:iB71E8D3FA0EEC735
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016828 Genomic DNA. Translation: AAO89939.1.
RefSeqiNP_819425.1. NC_002971.3.
WP_005771977.1. NZ_CCNR01000056.1.

Genome annotation databases

EnsemblBacteriaiAAO89939; AAO89939; CBU_0386.
GeneIDi1208269.
KEGGicbu:CBU_0386.
PATRICi17929469. VBICoxBur82552_0381.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016828 Genomic DNA. Translation: AAO89939.1.
RefSeqiNP_819425.1. NC_002971.3.
WP_005771977.1. NZ_CCNR01000056.1.

3D structure databases

ProteinModelPortaliQ83ED9.
SMRiQ83ED9. Positions 2-83.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi227377.CBU_0386.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAO89939; AAO89939; CBU_0386.
GeneIDi1208269.
KEGGicbu:CBU_0386.
PATRICi17929469. VBICoxBur82552_0381.

Phylogenomic databases

eggNOGiCOG0211.
HOGENOMiHOG000111610.
KOiK02899.
OMAiKDHTLHA.
OrthoDBiEOG6N94H6.

Enzyme and pathway databases

BioCyciCBUR227377:GJ7S-389-MONOMER.

Family and domain databases

HAMAPiMF_00539. Ribosomal_L27.
InterProiIPR001684. Ribosomal_L27.
IPR018261. Ribosomal_L27_CS.
[Graphical view]
PANTHERiPTHR15893. PTHR15893. 1 hit.
PfamiPF01016. Ribosomal_L27. 1 hit.
[Graphical view]
PRINTSiPR00063. RIBOSOMALL27.
ProDomiPD003114. Ribosomal_L27. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00062. L27. 1 hit.
PROSITEiPS00831. RIBOSOMAL_L27. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RSA 493 / Nine Mile phase I.

Entry informationi

Entry nameiRL27_COXBU
AccessioniPrimary (citable) accession number: Q83ED9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 2003
Last sequence update: June 1, 2003
Last modified: May 27, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Coxiella burnetii
    Coxiella burnetii (strain RSA 493): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.