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Q83DP1

- Y656_COXBU

UniProt

Q83DP1 - Y656_COXBU

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Protein

Nucleoid-associated protein CBU_0656

Gene

CBU_0656

Organism
Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.UniRule annotation

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciCBUR227377:GJ7S-650-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleoid-associated protein CBU_0656UniRule annotation
Gene namesi
Ordered Locus Names:CBU_0656
OrganismiCoxiella burnetii (strain RSA 493 / Nine Mile phase I)
Taxonomic identifieri227377 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella
ProteomesiUP000002671: Chromosome

Subcellular locationi

Cytoplasmnucleoid UniRule annotation

GO - Cellular componenti

  1. bacterial nucleoid Source: UniProtKB-HAMAP
  2. cytoplasm Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 110110Nucleoid-associated protein CBU_0656PRO_0000170389Add
BLAST

Proteomic databases

PRIDEiQ83DP1.

Interactioni

Subunit structurei

Homodimer.UniRule annotation

Protein-protein interaction databases

STRINGi227377.CBU_0656.

Structurei

3D structure databases

ProteinModelPortaliQ83DP1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the YbaB/EbfC family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0718.
HOGENOMiHOG000293239.
KOiK09747.
OMAiFQAMQDE.
OrthoDBiEOG6DVJWP.

Family and domain databases

Gene3Di3.30.1310.10. 1 hit.
HAMAPiMF_00274. DNA_YbaB_EbfC.
InterProiIPR004401. YbaB.
[Graphical view]
PfamiPF02575. YbaB_DNA_bd. 1 hit.
[Graphical view]
PIRSFiPIRSF004555. UCP004555. 1 hit.
SUPFAMiSSF82607. SSF82607. 1 hit.
TIGRFAMsiTIGR00103. DNA_YbaB_EbfC. 1 hit.

Sequencei

Sequence statusi: Complete.

Q83DP1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MIGGKFNLGS LMKNAKKIQE MMQKAQDELA KIRVTGESGA GMVKLTMTAQ
60 70 80 90 100
HEVVEMNLDD ELLKESKEVI EDLIKAALND ANQKILKITQ EKMMSAGSLF
110
GGNESDNEET
Length:110
Mass (Da):12,103
Last modified:June 1, 2003 - v1
Checksum:iE014D59360A1D894
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016828 Genomic DNA. Translation: AAO90200.1.
RefSeqiNP_819686.1. NC_002971.3.

Genome annotation databases

EnsemblBacteriaiAAO90200; AAO90200; CBU_0656.
GeneIDi1208541.
KEGGicbu:CBU_0656.
PATRICi17929989. VBICoxBur82552_0639.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016828 Genomic DNA. Translation: AAO90200.1 .
RefSeqi NP_819686.1. NC_002971.3.

3D structure databases

ProteinModelPortali Q83DP1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 227377.CBU_0656.

Proteomic databases

PRIDEi Q83DP1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAO90200 ; AAO90200 ; CBU_0656 .
GeneIDi 1208541.
KEGGi cbu:CBU_0656.
PATRICi 17929989. VBICoxBur82552_0639.

Phylogenomic databases

eggNOGi COG0718.
HOGENOMi HOG000293239.
KOi K09747.
OMAi FQAMQDE.
OrthoDBi EOG6DVJWP.

Enzyme and pathway databases

BioCyci CBUR227377:GJ7S-650-MONOMER.

Family and domain databases

Gene3Di 3.30.1310.10. 1 hit.
HAMAPi MF_00274. DNA_YbaB_EbfC.
InterProi IPR004401. YbaB.
[Graphical view ]
Pfami PF02575. YbaB_DNA_bd. 1 hit.
[Graphical view ]
PIRSFi PIRSF004555. UCP004555. 1 hit.
SUPFAMi SSF82607. SSF82607. 1 hit.
TIGRFAMsi TIGR00103. DNA_YbaB_EbfC. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RSA 493 / Nine Mile phase I.

Entry informationi

Entry nameiY656_COXBU
AccessioniPrimary (citable) accession number: Q83DP1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 10, 2004
Last sequence update: June 1, 2003
Last modified: October 1, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Coxiella burnetii
    Coxiella burnetii (strain RSA 493): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3