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Q83DP1

- Y656_COXBU

UniProt

Q83DP1 - Y656_COXBU

Protein

Nucleoid-associated protein CBU_0656

Gene

CBU_0656

Organism
Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.UniRule annotation

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-HAMAP

    Keywords - Ligandi

    DNA-binding

    Enzyme and pathway databases

    BioCyciCBUR227377:GJ7S-650-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Nucleoid-associated protein CBU_0656UniRule annotation
    Gene namesi
    Ordered Locus Names:CBU_0656
    OrganismiCoxiella burnetii (strain RSA 493 / Nine Mile phase I)
    Taxonomic identifieri227377 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella
    ProteomesiUP000002671: Chromosome

    Subcellular locationi

    Cytoplasmnucleoid UniRule annotation

    GO - Cellular componenti

    1. bacterial nucleoid Source: UniProtKB-HAMAP
    2. cytoplasm Source: UniProtKB-HAMAP

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 110110Nucleoid-associated protein CBU_0656PRO_0000170389Add
    BLAST

    Proteomic databases

    PRIDEiQ83DP1.

    Interactioni

    Subunit structurei

    Homodimer.UniRule annotation

    Protein-protein interaction databases

    STRINGi227377.CBU_0656.

    Structurei

    3D structure databases

    ProteinModelPortaliQ83DP1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the YbaB/EbfC family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0718.
    HOGENOMiHOG000293239.
    KOiK09747.
    OMAiFQAMQDE.
    OrthoDBiEOG6DVJWP.

    Family and domain databases

    Gene3Di3.30.1310.10. 1 hit.
    HAMAPiMF_00274. DNA_YbaB_EbfC.
    InterProiIPR004401. YbaB.
    [Graphical view]
    PfamiPF02575. YbaB_DNA_bd. 1 hit.
    [Graphical view]
    PIRSFiPIRSF004555. UCP004555. 1 hit.
    SUPFAMiSSF82607. SSF82607. 1 hit.
    TIGRFAMsiTIGR00103. DNA_YbaB_EbfC. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q83DP1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIGGKFNLGS LMKNAKKIQE MMQKAQDELA KIRVTGESGA GMVKLTMTAQ    50
    HEVVEMNLDD ELLKESKEVI EDLIKAALND ANQKILKITQ EKMMSAGSLF 100
    GGNESDNEET 110
    Length:110
    Mass (Da):12,103
    Last modified:June 1, 2003 - v1
    Checksum:iE014D59360A1D894
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016828 Genomic DNA. Translation: AAO90200.1.
    RefSeqiNP_819686.1. NC_002971.3.

    Genome annotation databases

    EnsemblBacteriaiAAO90200; AAO90200; CBU_0656.
    GeneIDi1208541.
    KEGGicbu:CBU_0656.
    PATRICi17929989. VBICoxBur82552_0639.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016828 Genomic DNA. Translation: AAO90200.1 .
    RefSeqi NP_819686.1. NC_002971.3.

    3D structure databases

    ProteinModelPortali Q83DP1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 227377.CBU_0656.

    Proteomic databases

    PRIDEi Q83DP1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAO90200 ; AAO90200 ; CBU_0656 .
    GeneIDi 1208541.
    KEGGi cbu:CBU_0656.
    PATRICi 17929989. VBICoxBur82552_0639.

    Phylogenomic databases

    eggNOGi COG0718.
    HOGENOMi HOG000293239.
    KOi K09747.
    OMAi FQAMQDE.
    OrthoDBi EOG6DVJWP.

    Enzyme and pathway databases

    BioCyci CBUR227377:GJ7S-650-MONOMER.

    Family and domain databases

    Gene3Di 3.30.1310.10. 1 hit.
    HAMAPi MF_00274. DNA_YbaB_EbfC.
    InterProi IPR004401. YbaB.
    [Graphical view ]
    Pfami PF02575. YbaB_DNA_bd. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF004555. UCP004555. 1 hit.
    SUPFAMi SSF82607. SSF82607. 1 hit.
    TIGRFAMsi TIGR00103. DNA_YbaB_EbfC. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RSA 493 / Nine Mile phase I.

    Entry informationi

    Entry nameiY656_COXBU
    AccessioniPrimary (citable) accession number: Q83DP1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 10, 2004
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 64 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Coxiella burnetii
      Coxiella burnetii (strain RSA 493): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3