Q83DP1 (Y656_COXBU) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Nucleoid-associated protein CBU_0656

Gene names

Ordered Locus Names:

CBU_0656

Organism

Coxiella burnetii (strain RSA 493 / Nine Mile phase I) [Reference proteome] [HAMAP]

Taxonomic identifier

227377 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Legionellales › Coxiellaceae › Coxiella › Coxiella burnetii

Protein attributes

Sequence length	110 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection By similarity. HAMAP-Rule MF_00274
Subunit structure	Homodimer By similarity.
Subcellular location	Cytoplasm › nucleoid By similarity.
Sequence similarities	Belongs to the YbaB/EbfC family.

Ontologies

Keywords
Cellular component	Cytoplasm
Ligand	DNA-binding
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	bacterial nucleoid Inferred from electronic annotation. Source: HAMAP cytoplasm Inferred from electronic annotation. Source: HAMAP
Molecular_function	DNA binding Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 110	110	Nucleoid-associated protein CBU_0656 HAMAP-Rule MF_00274		PRO_0000170389

Sequences

	Sequence		Length	Mass (Da)
	Q83DP1 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: E014D59360A1D894	FASTA	110	12,103
	10 20 30 40 50 60 MIGGKFNLGS LMKNAKKIQE MMQKAQDELA KIRVTGESGA GMVKLTMTAQ HEVVEMNLDD 70 80 90 100 110 ELLKESKEVI EDLIKAALND ANQKILKITQ EKMMSAGSLF GGNESDNEET

References

[1]

"Complete genome sequence of the Q-fever pathogen, Coxiella burnetii." Seshadri R., Paulsen I.T., Eisen J.A., Read T.D., Nelson K.E., Nelson W.C., Ward N.L., Tettelin H., Davidsen T.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Brinkac L.M., Madupu R., Dodson R.J., Khouri H.M., Lee K.H., Carty H.A. , Scanlan D., Heinzen R.A., Thompson H.A., Samuel J.E., Fraser C.M., Heidelberg J.F. Proc. Natl. Acad. Sci. U.S.A. 100:5455-5460(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RSA 493 / Nine Mile phase I.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE016828 Genomic DNA. Translation: AAO90200.1.
RefSeq	NP_819686.1. NC_002971.3.
3D structure databases
ProteinModelPortal	Q83DP1.
ModBase	Search...
Protein-protein interaction databases
STRING	227377.CBU_0656.
Proteomic databases
PRIDE	Q83DP1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAO90200; AAO90200; CBU_0656.
GeneID	1208541.
KEGG	cbu:CBU_0656.
PATRIC	17929989. VBICoxBur82552_0639.
Phylogenomic databases
eggNOG	COG0718.
HOGENOM	HOG000293239.
KO	K09747.
OMA	FGDMMKQ.
ProtClustDB	PRK00153.
Enzyme and pathway databases
BioCyc	CBUR227377:GJ7S-650-MONOMER.
Family and domain databases
Gene3D	3.30.1310.10. 1 hit.
HAMAP	MF_00274. DNA_YbaB_EbfC.
InterPro	IPR004401. YbaB-like. [Graphical view]
Pfam	PF02575. YbaB_DNA_bd. 1 hit. [Graphical view]
PIRSF	PIRSF004555. UCP004555. 1 hit.
SUPFAM	SSF82607. CHP00103. 1 hit.
TIGRFAMs	TIGR00103. DNA_YbaB_EbfC. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Y656_COXBU

Accession

Primary (citable) accession number: Q83DP1

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 10, 2004
Last sequence update:	June 1, 2003
Last modified:	May 1, 2013
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program