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Q83DP1 (Y656_COXBU) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Nucleoid-associated protein CBU_0656
Gene names
Ordered Locus Names:CBU_0656
OrganismCoxiella burnetii (strain RSA 493 / Nine Mile phase I) [Reference proteome] [HAMAP]
Taxonomic identifier227377 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella

Protein attributes

Sequence length110 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection By similarity. HAMAP-Rule MF_00274

Subunit structure

Homodimer By similarity. HAMAP-Rule MF_00274

Subcellular location

Cytoplasmnucleoid By similarity HAMAP-Rule MF_00274.

Sequence similarities

Belongs to the YbaB/EbfC family.

Ontologies

Keywords
   Cellular componentCytoplasm
   LigandDNA-binding
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentbacterial nucleoid

Inferred from electronic annotation. Source: UniProtKB-HAMAP

cytoplasm

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 110110Nucleoid-associated protein CBU_0656 HAMAP-Rule MF_00274
PRO_0000170389

Sequences

Sequence LengthMass (Da)Tools
Q83DP1 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: E014D59360A1D894

FASTA11012,103
        10         20         30         40         50         60 
MIGGKFNLGS LMKNAKKIQE MMQKAQDELA KIRVTGESGA GMVKLTMTAQ HEVVEMNLDD 

        70         80         90        100        110 
ELLKESKEVI EDLIKAALND ANQKILKITQ EKMMSAGSLF GGNESDNEET 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE016828 Genomic DNA. Translation: AAO90200.1.
RefSeqNP_819686.1. NC_002971.3.

3D structure databases

ProteinModelPortalQ83DP1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING227377.CBU_0656.

Proteomic databases

PRIDEQ83DP1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAO90200; AAO90200; CBU_0656.
GeneID1208541.
KEGGcbu:CBU_0656.
PATRIC17929989. VBICoxBur82552_0639.

Phylogenomic databases

eggNOGCOG0718.
HOGENOMHOG000293239.
KOK09747.
OMAFQAMQDE.
OrthoDBEOG6DVJWP.

Enzyme and pathway databases

BioCycCBUR227377:GJ7S-650-MONOMER.

Family and domain databases

Gene3D3.30.1310.10. 1 hit.
HAMAPMF_00274. DNA_YbaB_EbfC.
InterProIPR004401. YbaB.
[Graphical view]
PfamPF02575. YbaB_DNA_bd. 1 hit.
[Graphical view]
PIRSFPIRSF004555. UCP004555. 1 hit.
SUPFAMSSF82607. SSF82607. 1 hit.
TIGRFAMsTIGR00103. DNA_YbaB_EbfC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY656_COXBU
AccessionPrimary (citable) accession number: Q83DP1
Entry history
Integrated into UniProtKB/Swiss-Prot: May 10, 2004
Last sequence update: June 1, 2003
Last modified: May 14, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Coxiella burnetii

Coxiella burnetii (strain RSA 493): entries and gene names