Q83D39 (RL31_COXBU) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L31

Gene names

Name:	rpmE
Ordered Locus Names:	CBU_0905

Organism

Coxiella burnetii (strain RSA 493 / Nine Mile phase I) [Reference proteome] [HAMAP]

Taxonomic identifier

227377 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Legionellales › Coxiellaceae › Coxiella › Coxiella burnetii

Protein attributes

Sequence length	79 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds the 23S rRNA By similarity.
Cofactor	Binds 1 zinc ion per subunit By similarity.
Subunit structure	Part of the 50S ribosomal subunit By similarity.
Sequence similarities	Belongs to the ribosomal protein L31P family. Type A subfamily.

Ontologies

Keywords
Ligand	Metal-binding RNA-binding Zinc rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 79	79	50S ribosomal protein L31 HAMAP-Rule MF_00501		PRO_0000173098
Sites
	Metal binding	16	1	Zinc By similarity
	Metal binding	18	1	Zinc By similarity
	Metal binding	37	1	Zinc By similarity
	Metal binding	40	1	Zinc By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q83D39 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 1BB719E17C8329FC	FASTA	79	9,078
	10 20 30 40 50 60 MKENIHPPYK QIKVTCSCGN TFMTGSTLDR ELHLEICSAC HPFYTGQQKM VDTAGRVERF 70 RKKYAKRRAA NASPEDEKK

References

[1]

"Complete genome sequence of the Q-fever pathogen, Coxiella burnetii." Seshadri R., Paulsen I.T., Eisen J.A., Read T.D., Nelson K.E., Nelson W.C., Ward N.L., Tettelin H., Davidsen T.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Brinkac L.M., Madupu R., Dodson R.J., Khouri H.M., Lee K.H., Carty H.A. , Scanlan D., Heinzen R.A., Thompson H.A., Samuel J.E., Fraser C.M., Heidelberg J.F. Proc. Natl. Acad. Sci. U.S.A. 100:5455-5460(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RSA 493 / Nine Mile phase I.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE016828 Genomic DNA. Translation: AAO90434.1.
RefSeq	NP_819920.1. NC_002971.3.
3D structure databases
ProteinModelPortal	Q83D39.
SMR	Q83D39. Positions 1-69.
ModBase	Search...
Protein-protein interaction databases
STRING	227377.CBU_0905.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAO90434; AAO90434; CBU_0905.
GeneID	1208798.
KEGG	cbu:CBU_0905.
PATRIC	17930511. VBICoxBur82552_0892.
Phylogenomic databases
eggNOG	COG0254.
HOGENOM	HOG000284895.
KO	K02909.
OMA	DICNNCH.
ProtClustDB	PRK00019.
Enzyme and pathway databases
BioCyc	CBUR227377:GJ7S-896-MONOMER.
Family and domain databases
HAMAP	MF_00501. Ribosomal_L31_1.
InterPro	IPR002150. Ribosomal_L31. [Graphical view]
Pfam	PF01197. Ribosomal_L31. 1 hit. [Graphical view]
PRINTS	PR01249. RIBOSOMALL31.
TIGRFAMs	TIGR00105. L31. 1 hit.
PROSITE	PS01143. RIBOSOMAL_L31. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL31_COXBU

Accession

Primary (citable) accession number: Q83D39

Entry history

Integrated into UniProtKB/Swiss-Prot:	August 16, 2005
Last sequence update:	June 1, 2003
Last modified:	May 1, 2013
This is version 55 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program