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Q83D39

- RL31_COXBU

UniProt

Q83D39 - RL31_COXBU

Protein

50S ribosomal protein L31

Gene

rpmE

Organism
Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Binds the 23S rRNA.UniRule annotation

    Cofactori

    Binds 1 zinc ion per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi16 – 161ZincUniRule annotation
    Metal bindingi18 – 181ZincUniRule annotation
    Metal bindingi37 – 371ZincUniRule annotation
    Metal bindingi40 – 401ZincUniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. rRNA binding Source: UniProtKB-KW
    3. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    Metal-binding, RNA-binding, rRNA-binding, Zinc

    Enzyme and pathway databases

    BioCyciCBUR227377:GJ7S-896-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L31UniRule annotation
    Gene namesi
    Name:rpmEUniRule annotation
    Ordered Locus Names:CBU_0905
    OrganismiCoxiella burnetii (strain RSA 493 / Nine Mile phase I)
    Taxonomic identifieri227377 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella
    ProteomesiUP000002671: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 797950S ribosomal protein L31PRO_0000173098Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit.UniRule annotation

    Protein-protein interaction databases

    STRINGi227377.CBU_0905.

    Structurei

    3D structure databases

    ProteinModelPortaliQ83D39.
    SMRiQ83D39. Positions 1-69.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L31P family. Type A subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0254.
    HOGENOMiHOG000284895.
    KOiK02909.
    OMAiAHISKKA.
    OrthoDBiEOG6DVJZM.

    Family and domain databases

    HAMAPiMF_00501. Ribosomal_L31_1.
    InterProiIPR002150. Ribosomal_L31.
    IPR027491. Ribosomal_L31_A.
    [Graphical view]
    PfamiPF01197. Ribosomal_L31. 1 hit.
    [Graphical view]
    PRINTSiPR01249. RIBOSOMALL31.
    TIGRFAMsiTIGR00105. L31. 1 hit.
    PROSITEiPS01143. RIBOSOMAL_L31. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q83D39-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKENIHPPYK QIKVTCSCGN TFMTGSTLDR ELHLEICSAC HPFYTGQQKM   50
    VDTAGRVERF RKKYAKRRAA NASPEDEKK 79
    Length:79
    Mass (Da):9,078
    Last modified:June 1, 2003 - v1
    Checksum:i1BB719E17C8329FC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016828 Genomic DNA. Translation: AAO90434.1.
    RefSeqiNP_819920.1. NC_002971.3.

    Genome annotation databases

    EnsemblBacteriaiAAO90434; AAO90434; CBU_0905.
    GeneIDi1208798.
    KEGGicbu:CBU_0905.
    PATRICi17930511. VBICoxBur82552_0892.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016828 Genomic DNA. Translation: AAO90434.1 .
    RefSeqi NP_819920.1. NC_002971.3.

    3D structure databases

    ProteinModelPortali Q83D39.
    SMRi Q83D39. Positions 1-69.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 227377.CBU_0905.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAO90434 ; AAO90434 ; CBU_0905 .
    GeneIDi 1208798.
    KEGGi cbu:CBU_0905.
    PATRICi 17930511. VBICoxBur82552_0892.

    Phylogenomic databases

    eggNOGi COG0254.
    HOGENOMi HOG000284895.
    KOi K02909.
    OMAi AHISKKA.
    OrthoDBi EOG6DVJZM.

    Enzyme and pathway databases

    BioCyci CBUR227377:GJ7S-896-MONOMER.

    Family and domain databases

    HAMAPi MF_00501. Ribosomal_L31_1.
    InterProi IPR002150. Ribosomal_L31.
    IPR027491. Ribosomal_L31_A.
    [Graphical view ]
    Pfami PF01197. Ribosomal_L31. 1 hit.
    [Graphical view ]
    PRINTSi PR01249. RIBOSOMALL31.
    TIGRFAMsi TIGR00105. L31. 1 hit.
    PROSITEi PS01143. RIBOSOMAL_L31. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RSA 493 / Nine Mile phase I.

    Entry informationi

    Entry nameiRL31_COXBU
    AccessioniPrimary (citable) accession number: Q83D39
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: August 16, 2005
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 61 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Coxiella burnetii
      Coxiella burnetii (strain RSA 493): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3